Caldicellulosiruptor obsidiansis: COB47_1650
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Entry
COB47_1650 CDS
T01293
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COB47_1650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cob03400
]
COB47_1650
Enzymes [BR:
cob01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
COB47_1650
DNA repair and recombination proteins [BR:
cob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
COB47_1650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADL42933
UniProt:
D9TFG3
LinkDB
All DBs
Position
1758290..1758847
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AA seq
185 aa
AA seq
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MLTWEELENACISCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAG
KFLDLALTSLELSREKDFYICNILKCRPPNNRVPTEVEAQNCLPFLKAQIKLISPKIIVC
LGATAMKYILGKDLKITQDRGKWFEKGGFWIMATYHPAALLRDPGKREDFYRDLKSVKER
LEKIK
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctgacatgggaagagcttgaaaatgcgtgtatttcatgtgaaaaatgccctatttct
aaaaatcgcacaaacgttgtagtaggtgatggaaataaaaatgcaaagcttgtgtttgta
ggtgaagctccgggtgaggaagaagacaagcaaggaaaaccgtttgtaggaagagcagga
aagtttttagacttagctttgacttctctggagctttcaagagaaaaagatttttatatc
tgcaacattttaaagtgtagacccccaaacaaccgcgttccaacagaggtggaggctcaa
aactgcttgccttttttgaaagcccaaataaaacttatctccccaaaaataattgtctgc
ctcggtgcaacagctatgaaatatattcttggcaaagatcttaaaatcactcaagacagg
ggaaagtggtttgaaaaaggtggtttttggattatggctacataccatccagcagcactt
ttaagagacccaggtaaaagagaggatttttacagggatttgaaaagtgtaaaggaaagg
ctggagaagataaagtag
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