Colwellia sp. PAMC 21821: A3Q33_11560
Help
Entry
A3Q33_11560 CDS
T04816
Symbol
gabD
Name
(GenBank) NAD-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw00250
Alanine, aspartate and glutamate metabolism
colw00310
Lysine degradation
colw00350
Tyrosine metabolism
colw00650
Butanoate metabolism
colw00760
Nicotinate and nicotinamide metabolism
colw01100
Metabolic pathways
colw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A3Q33_11560 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A3Q33_11560 (gabD)
00310 Lysine degradation
A3Q33_11560 (gabD)
00350 Tyrosine metabolism
A3Q33_11560 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A3Q33_11560 (gabD)
Enzymes [BR:
colw01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A3Q33_11560 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A3Q33_11560 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A3Q33_11560 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Ldh_2
Motif
Other DBs
NCBI-ProteinID:
ARD44884
LinkDB
All DBs
Position
2723368..2724831
Genome browser
AA seq
487 aa
AA seq
DB search
MTIQLKDNSLFKTQAFISGEWANSDNNETFPVYNPATGELLAEVANVGLNETRRAIKSAH
TAMASWRELPAKARCDILERWHTLMLENVEDLALLMTAEQGKPLFESRGEVAYGASFIKW
FAEEGKRVYGDTMPATSDRRSIAIKQPIGVVAAITPWNFPNAMIARKVAPALAVGCAMVL
KPAAETPLSALALVELANRAGIPPGLFSVLPTSDAATVGNEMTSNTIVKKVTFTGSTQVG
KLLMKQCADTVKRTSMELGGNAPIIIFDDADLDLAVSGALISKYRNSGQTCICANRIIVQ
AGIYDAFVKKFVAAVNKFTIGNGLDDKTSHGPVITAKATIEIHSKVQSAIAEGAVVETGG
NFSELGECFYQPTVLTNVNDQMRVFREEIFGPVAPIFKFSTEEEAIAMANDTEFGLAAYL
YTEHMGRCWRVSEALEYGMVGVNETAISSEVIPFGGVKESGQGREGSKYGLDDYLEIKYI
CIGGLQR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacaatacaacttaaagataatagtttgtttaagactcaggcttttataagcggtgag
tgggctaatagtgataacaatgaaacatttccagtttacaaccctgcgacaggagagctt
ttagcggaagtcgccaatgtaggattaaatgaaacccggcgcgcaattaaaagtgcgcat
acggcaatggccagttggcgtgaactcccagctaaagcgcgttgtgatattttagagcgc
tggcatacgttaatgctcgaaaatgtcgaagatttagcgttattaatgacggcagaacaa
ggtaagcctttgtttgagtctcgtggtgaagttgcttatggcgcttcttttattaagtgg
ttcgctgaggaaggtaagcgtgtttatggcgatactatgccagccacaagtgatcgacgt
agtatcgctattaagcaacctatcggggttgttgccgcaattacgccatggaattttcct
aatgcgatgatcgcgcgcaaagtagcgcctgcgcttgctgttggttgtgccatggtacta
aaacctgcagcagaaacaccgctctcagcattagcgctagtcgaattggccaaccgtgca
ggaataccaccaggactatttagtgttttaccaacaagtgatgcagcaacggttggtaat
gaaatgacctcaaatacaatcgttaaaaaagtcaccttcactggctctacacaagtaggt
aagcttttgatgaaacaatgtgcagacacggtaaagcggacctcgatggagcttggaggt
aacgcaccgatcattatttttgatgatgcagatcttgatttagctgtttctggagcacta
atatcaaaatatcgtaactcaggccaaacttgtatttgtgcgaataggattatcgttcaa
gcaggcatttatgatgccttcgtgaaaaaatttgttgcagcagtcaataaatttactatt
ggcaatggtctggacgataagactagccacggcccagtgatcacagcaaaagcaacgatc
gaaattcattcaaaagtacaaagtgctatagctgaaggtgctgttgttgaaacgggtggt
aatttcagtgaactaggtgagtgcttttatcaacctacagtattaaccaatgtaaatgat
caaatgcgagttttccgagaagaaatttttggcccggtagcgcctatttttaagttttct
acggaagaagaagctattgctatggccaatgacaccgagtttggcctagccgcgtacctt
tatactgaacatatgggacgatgttggcgagtatcagaagcgcttgaatatggcatggtt
ggggttaatgagaccgcgataagttctgaagttatcccatttggcggtgttaaagagtca
ggtcaggggcgcgaaggttccaaatatggactagacgattatttggaaataaagtatatc
tgcatcggcggtcttcagcgctaa
DBGET
integrated database retrieval system
