KEGG   Carica papaya (papaya): 110810133
Entry
110810133         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03082  ATP-dependent chromatin remodeling
cpap03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    110810133
   03083 Polycomb repressive complex
    110810133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cpap03036]
    110810133
Enzymes [BR:cpap01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     110810133
Chromosome and associated proteins [BR:cpap03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     110810133
   HDAC complexes
    Sin3A-HDAC complex
     110810133
    BRAF-HDAC complex
     110810133
    REST complex
     110810133
    SHIP complex
     110810133
    MiDAC complex
     110810133
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     110810133
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    110810133
  Chromatin remodeling factors
   NuRD complex
    110810133
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 110810133
NCBI-ProteinID: XP_021891899
LinkDB
Position
Unknown
AA seq 469 aa
MADAMGGASLASGPDGKKRRVSYFYEPTIGDYYYGQSHPMKPHRIRMAHNIIVHYGLHRR
MEINRPFPAGLADIRRFHSDDYVEFLASVSPESLGDPAYSRHLKRFNVXEDCPVFDGLFP
FCQASAGGSIGAAVKLNRSDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR
RVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGVGNGKYYALNVPL
NDGMDDESFKGLFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHVEPC
NMENLNSPKDMEKIRNMLLEQLSRISHAPSVPFQTTPPTTQVPEKVEENMDQRPKPRIWN
GEDYESDPDDDEKPRHIFSNSDGRLVQDVEMRDAAYEVKEEKAEPKPPS
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggcggacgcgatgggaggcgcgtcgctggcctctggacccgatggtaagaagcgccgg
gttagctacttctacgaaccgaccatcggggactactactacggccagagtcacccgatg
aagccccatcggatccggatggcccacaacattattgttcactacggccttcaccgtcgg
atggagatcaatcgacccttccccgccgggctcgctgacatacggagattccacagcgat
gattacgtcgaattcctcgcctccgtctcaccggagtctctcggtgaccctgcctactct
cgccacctgaagcgcttcaacgtcngcgaggactgccccgtcttcgacggcctcttcccc
ttttgtcaggcctctgctggtggttctatcggtgccgccgtcaagctcaaccggtccgat
gccgatatagccatcaactgggccggcggtctccaccatgctaagaagagcgaggcttct
ggtttctgctatgttaatgacattgtgcttggcattcttgagttgctcaaggttcacagg
cgtgtgctctatgtagatatcgatgttcaccatggagatggtgtggaggaggcattttat
acgacagacagagtcatgactgtgtcttttcataaatttggagatttctttccagggact
gggcacattagggatgtcggagtaggaaatgggaaatattatgctcttaatgtccctcta
aatgatgggatggatgatgaaagttttaaaggtctgtttagacccatcatccaaaaagta
atggaggtgtatcagccagatgcagttgttctccagtgtggagcggattcattatctggt
gaccggttaggatgcttcaacttgtctgtgaagggccatgcagattgccttcgatttctt
aggtcttacaatgttcctctgatggtgctaggtgggggaggttatactattcggaatgtc
gcccgttgctggtgctatgagacagcggttgcagttggggtggaacctgataacaaattg
ccttataatgagtattatgaatattttggcccggattatacccttcatgttgaaccatgt
aacatggagaatctgaactcacccaaagatatggaaaagataaggaatatgttactagag
caactttcaagaatatctcatgctcctagtgtacctttccagactaccccaccaactact
caagtgccagaaaaggtggaggagaacatggatcaaaggccaaaaccacgcatttggaat
ggtgaagattacgagtcagatcctgatgatgatgagaagccgcgtcatattttctcaaat
tctgatggtcgacttgtgcaagatgttgagatgagagatgctgcatatgaagtgaaagaa
gagaaggcagaaccaaagccaccgtcttga

DBGET integrated database retrieval system