Clostridium pasteurianum BC1: Clopa_4399
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Entry
Clopa_4399 CDS
T02645
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cpas
Clostridium pasteurianum BC1
Pathway
cpas00550
Peptidoglycan biosynthesis
cpas01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Clopa_4399
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpas01011
]
Clopa_4399
Peptidoglycan biosynthesis and degradation proteins [BR:
cpas01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Clopa_4399
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
G-alpha
Motif
Other DBs
NCBI-ProteinID:
AGK99111
UniProt:
R4KBN9
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All DBs
Position
complement(4464280..4466073)
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AA seq
597 aa
AA seq
DB search
MSILKVKKSSTKILINKRLLGVFMLFGLVFILVIGRLFYLMVTDSKFYKVKALQQWTSQI
TVPAERGRILDRNDNEFVVSAEAYRVDIDMNTLRQALKIKSIGMDQLSNELSTILSMPVK
QVSNILYLKSPEGMPVKFATLARKIDKTQADKIKALNISGFIISNDSKRVYKNNNFLAST
LGYTNSDGNGVSGVELSYNKELAGIPGQKILETDNRGNQLPYENSQYIAPVNGKDLVLTI
DQTIQLYAEQAAQKALIDNKAKSVTITVMNPKNGEILAMVNKPDYDPNNPNGAKNQTGEQ
IAASWKNNAVQNTFEPGSIFKVITSYAAMAENVVNDATRFPDPGYVIVDGKRINEWNPAG
FPLQTFQDIIKNSSNVGFVKLGTELLGKDKLFKYINLFGFGQKTGVDLPGESTGIVPPIK
NVNKVDLATISFGQGISVSAVQYLAAFNSVANGGTWIRPHVMKEIVHTDSNNKQIVDTTY
NNLGEKKILDPNIASTLRTYLRKVVTDGVGSAAEVPGLDIAGKTGTAQKSSPTGGYAPGK
YMSSFAGMAPENDPKITMLISIDEPDQSKYYAGQTAAPVAKDLFREIFDYMNSKGIN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatactgaaagtaaaaaaaagtagcaccaaaattcttataaataaaagacttttg
ggtgtatttatgttatttggattagtgtttatattggtaataggaagattattttatctt
atggttactgattctaaattttataaagttaaggctctacaacaatggacaagccagata
accgttccagcagagagaggccgtatacttgatagaaacgataatgagtttgttgtaagc
gcggaagcatatagagttgatatagatatgaatacattaaggcaagctttaaaaattaag
tcaataggtatggaccagctatctaatgaattatcaactatattaagtatgcctgttaaa
caggtgtctaatatattatatttaaagtctcctgaaggtatgcctgttaaatttgctact
cttgcaagaaaaatagataaaactcaggctgataaaattaaggcattaaatatatctggt
tttataatatccaatgattcaaaaagagtttacaaaaataataattttcttgccagtact
cttggatatacaaattcagatggaaatggtgtttcaggagtggaattaagctataataaa
gaattagctggaattccaggacagaaaattttggaaactgacaatcgaggcaatcagctt
ccttatgagaattcgcaatacattgctcctgtgaatggtaaggatttagtcttgactatt
gatcagacaatacaattatatgcagaacaagcagcacagaaggctttaatagataataag
gcaaaatcagttacaattacagtcatgaatcctaaaaatggtgaaatactagccatggta
aataaaccagattatgatccaaataatcctaatggggccaaaaaccagactggagagcag
attgctgcatcttggaaaaacaatgcagtacaaaacacctttgagcctggctccatattt
aaagtaataacttcctatgctgcaatggcagaaaatgttgtaaatgatgccactagattt
cctgatcctggatatgtaattgtagatggtaaacgtattaatgaatggaatccagcagga
tttccattacaaacttttcaggatataatcaaaaattccagtaatgttggttttgtaaag
cttggtacagaattgttaggtaaagataagttatttaagtatataaatttgtttggcttt
ggtcagaaaactggtgtagatttacctggcgagtccactggaatagtgccacctattaaa
aatgtaaataaggttgatctagcaactatatcttttggacaaggtatttcagtaagtgct
gtacaatatttggctgcttttaattctgtggcaaatggtggaacttggattagacctcat
gtaatgaaggagattgtgcatacagatagcaataacaagcaaattgtggatactacatat
aataacttaggagagaaaaagatacttgatcccaatattgccagcactttgaggacatat
ttaagaaaggttgttactgatggagttggatctgctgctgaagttcctggacttgatata
gcaggaaaaactggaacagctcaaaaatcaagccctacaggaggttacgcaccggggaaa
tatatgtcttcctttgctggtatggcgccagaaaacgatcctaagattactatgcttata
tctatagatgaaccagatcaatctaagtattatgctggacaaaccgcggctcctgtggcg
aaggatttgtttagagagatatttgattatatgaattcaaaggggataaattaa
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