Clostridium pasteurianum BC1: Clopa_4906
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Entry
Clopa_4906 CDS
T02645
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cpas
Clostridium pasteurianum BC1
Brite
KEGG Orthology (KO) [BR:
cpas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpas03016
]
Clopa_4906
Transfer RNA biogenesis [BR:
cpas03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Clopa_4906
Prokaryotic type
Methyltransferases
Clopa_4906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
AIG1
GTP_EFTU
cobW
Roc
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGK99580
UniProt:
R4KIX6
LinkDB
All DBs
Position
complement(4986637..4988046)
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AA seq
469 aa
AA seq
DB search
MVSLFSYQYCMKEFDTIAAIATALGEGGISIIRVSGNNSVKIVNSIFIPKNGGNILDIKP
YTMRYGNIVQLETKENIDEVIVSFMKGPKSFTAEDTIEINCHGGIFSTKRVLDEVLKAGA
RIAEPGEFTKRAFLNGRIDLSQAEAVMDIITSKTDISMKSAVMQSEGKLSREINSLREKL
LELIAHIEATVDYPEEDLEELTSENTIVKLNDILLEIAELINSADEGKILRDGLNTAIVG
KPNVGKSSLLNALLEEKRAIVTEIEGTTRDVIEEYINVSGIPIKLIDTAGIRETNDIVEK
IGVENSIKKIDEADLIIFMLDASRSLEDKDLDIIKHINGKKYIILLNKTDLPKKIKNEDF
KDLSSKYIIDISTKTGFGIDKLKDIIKELFFNGEIKYHDLIITNTRHKAALIRAKSNCED
AVNALKNTSAIDLASIDIRNAWYNLGQITGDTLEEDLLEKIFKNFCLGK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtttattttcttaccaatattgtatgaaagaatttgatactatagcagcaata
gcaacagctttaggtgaaggcggaatttctataattagagtttctggaaataattcagta
aaaatagtaaatagtatttttatacctaaaaatggaggtaatattctagatattaaacct
tatactatgagatacggtaatatagttcagctagaaactaaagaaaatatagatgaagtt
attgtaagttttatgaaaggtcctaaaagttttacagctgaagatactatagaaataaat
tgccatggaggtatcttttcaactaagagagtcttagatgaagttttaaaggctggtgcg
agaattgctgagccaggtgaatttacgaaaagggcttttctaaatggaagaatagatctt
agtcaggcagaggcagttatggatataataacttcaaaaactgatataagcatgaaatca
gctgttatgcagtcagaaggtaagctttcaagagaaattaatagtttacgggaaaaatta
ttagaattaatagctcatattgaagctacagtagattatccagaagaggatcttgaagag
ttaacttctgaaaatacaattgtgaagttaaatgacatattattagaaattgcagaatta
attaattctgcagatgaaggaaaaatattaagagatggtttaaatactgctatagttggt
aaacccaatgtaggtaaatcttcattgctaaacgctttgttagaagaaaaaagggctatt
gttacagaaattgaaggaactaccagggatgtaatagaagagtatataaatgtttcaggt
attcctataaagcttattgataccgctggaatacgtgaaactaatgatattgtagagaag
ataggagtagaaaattctataaaaaaaatagatgaagccgatctaataatattcatgtta
gatgcaagcagaagtttagaagataaagatttagatataataaaacatattaatggtaaa
aaatatattattctattaaataagacagatttgcctaaaaaaataaaaaatgaagatttt
aaagatttatcttcgaaatatataatagatatatctacaaaaacaggttttggtatagat
aaattaaaagatataattaaagaattgttttttaatggagaaataaaatatcatgactta
attattacaaatacgagacacaaagcagctttaattagagcaaagtctaattgtgaagat
gctgtaaatgctttaaaaaacacatcggctattgatctagcatcaatagatataagaaat
gcttggtataatttagggcagattactggagatactctagaagaggatttattagaaaaa
atatttaaaaatttttgcttgggaaagtag
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