KEGG   Clostridium perfringens 13: CPE1672
Entry
CPE1672           CDS       T00074                                 
Name
(GenBank) conserved hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cpe  Clostridium perfringens 13
Pathway
cpe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cpe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CPE1672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpe03019]
    CPE1672
Messenger RNA biogenesis [BR:cpe03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CPE1672
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH EMC3_TMCO1 PsaN KH_2 RIC3 DUF1400 FeoB_associated DUF4083
Other DBs
NCBI-ProteinID: BAB81378
UniProt: Q8XJT1
LinkDB
Position
complement(1946257..1947849)
AA seq 530 aa
MTPFYAKCFYRENKRGGVYMVVGILIGIIILGVVGFIQYTLIQKASKNRVESLEKEASLT
LEEAKREAESTKKEAILEAKEEVHKLRADLDKETRDRRNEIQRFERRLIQREESLDKKGE
MLEKREDSINKKSIEIQELEERVQNLYGEQRAELERISNLSSEDARTLLLDEVRREIKHE
SAMLIKELETKAKEEADKKSREIITTAIQRCAADHVSETTVHVVALPNDEMKGRIIGREG
RNIRTLETLTGVDLIIDDTPEAVILSSFDPIRREVARIALEKLIVDGRIHPARIEEMVER
AIKDVENDIKEEGEQATFETGVHGLHPEIIKLLGRLKYRTSYGQNVLKHSIEVSYLAGLM
ASELGLDVNLARRAGLLHDIGKGVDQEYEGPHAVIGGELAKKYHESPAVVNAIAAHHGDT
EMQTLEAVLVQAADAISAARPGARRETLEAYIKRLEKLEEIATSYEGVEKSYAIQAGREI
RIMVKPDQVDDAGAIEMARNIVKKIEEQLEYPGQIKINVIRETRAVDYAK
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgacacctttctacgcgaagtgtttttatagagagaataagcgaggaggtgtttatatg
gtagtaggaatacttataggaataataatattaggggtagtagggtttattcaatacact
cttatacaaaaagcttcaaaaaatagggtggaaagcttagaaaaagaagctagtttaaca
cttgaggaggctaaaagagaagctgaatcaacaaagaaagaagccatattagaagctaaa
gaagaggtgcacaaactaagagcagatcttgataaagaaactcgtgacagaagaaatgag
attcaaaggtttgaaagaagacttatccaaagggaagagtcattagataaaaaaggtgaa
atgcttgaaaaaagagaagatagcataaacaaaaaatctatagagattcaagaacttgaa
gaacgtgtacaaaatttatacggtgaacaaagagctgaacttgagagaatttcaaatctt
tcaagtgaagacgcaagaacattattattagatgaagtaagaagagaaataaaacatgaa
tcagctatgctaatcaaagaacttgagactaaggccaaagaagaagctgacaaaaaatca
agagaaataattactactgctattcaaagatgtgcagcagatcatgtttctgaaactaca
gtacatgttgttgccctacctaatgatgaaatgaaaggaagaatcattggtagagaaggt
agaaatataagaactttagaaacattaacaggagttgatttaataatagatgatactcca
gaggctgttattctttcaagcttcgatccaataagaagagaagttgctagaatagcttta
gaaaaattaattgtagatggaagaattcatccagctagaattgaagaaatggtagaaaga
gctattaaagatgtagaaaatgacattaaggaagagggagaacaagcaactttcgaaact
ggtgttcatggattacatccagaaataattaagcttctaggaagactaaagtacagaaca
agttatggtcaaaatgttttaaaacattcaatagaggtttcatatttagcaggattaatg
gcatctgaattaggtttagatgtaaatctagctagaagagcaggtcttttacatgatata
ggtaaaggggttgaccaagaatatgaggggcctcatgctgttataggtggagaacttgca
aagaaatatcatgaatcaccagctgtggtaaatgctatagcagcccatcatggtgataca
gaaatgcaaactcttgaagccgtacttgttcaagcagcagatgctatatcagcagctaga
cctggtgcaagaagagaaactttagaagcttatattaagagattagaaaaattagaagaa
atagctacttcatatgaaggtgtagaaaagtcatatgccattcaagctggaagagaaatt
agaattatggttaaaccagatcaagttgacgatgcaggggcaattgagatggcgagaaat
attgttaagaagatagaagaacaattagagtatccaggtcaaatcaagataaatgtaata
agagaaacccgtgcagttgactatgctaaataa

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