Cucurbita pepo subsp. pepo (vegetable marrow): 111782267
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Entry
111782267 CDS
T05351
Name
(RefSeq) cyclin-H1-1
KO
K06634
cyclin H
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03022
Basal transcription factors
cpep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111782267
09124 Replication and repair
03420 Nucleotide excision repair
111782267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpep03021
]
111782267
03400 DNA repair and recombination proteins [BR:
cpep03400
]
111782267
Transcription machinery [BR:
cpep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111782267
DNA repair and recombination proteins [BR:
cpep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111782267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
111782267
NCBI-ProteinID:
XP_023518875
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Position
LG19:4941922..4949069
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AA seq
332 aa
AA seq
DB search
MADFQTSTQRAKWILSPHELVGRYKAANQRAIEALEKFGATLMVVDADGSLSYPDPLINS
KENADKHSRPKPLSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVM
QHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPY
RSVEGYVHDMEEVFHENAERLQMLKETASLEVDKIMLTDAPLLFPPGQLALAALRRSNEV
HGVIDFERYLDSILSRQNSAHIISELYERFNSIDSWINKYAFPSEKDLKHINRKLKSCWG
LGSNDESKKREKKSKHKSKKSSNEMQNMPSHT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttccagacctcgactcaacgagccaaatggatcttgagtcctcacgagctg
gttggcaggtacaaagctgctaaccagagagcaatcgaagctctggagaagtttggagca
acactgatggtggtagatgcagacggatcattgtcctatccagaccctctgataaattca
aaagaaaatgctgacaaacattcccgccccaaacctttgagtattgaagaagagcaattt
atgcgagtattttacgagaacaaacttcaagaagtatgcaacaattttcattttcctcat
aaaatccaggcaacggctcttatatattttaagagattctacttacaatggtctgtgatg
caacataatcccaaaaatgtgatgttgacttgcatttatgcagcttgtaagatagaagaa
aatcatgtctcagctgaggagcttggcaaggggatttcacaggatcatcaaattattctc
aattatgagatgatagtttatcagagtctggaatttgatcttattgtttatgcaccttac
cgatcagttgaaggctatgtacatgatatggaggaagtcttccatgagaatgctgaaagg
cttcaaatgctgaaggaaacagcatcgttagaggttgataaaattatgttaacagatgcc
ccacttctcttccctcctgggcagttagcattggctgcattgcgcagatcaaatgaagtt
catggagttattgactttgaaaggtacctggatagtattctctctcgccaaaattctgca
catataatttctgagctctatgagcgttttaattcaattgactcatggattaataaatat
gcattcccttcagaaaaggacttaaagcacatcaacagaaaattaaaatcttgctgggga
ctgggctccaatgacgagagtaaaaaaagggagaagaaatcaaagcacaaatcaaagaag
agttcgaatgaaatgcagaatatgccttcgcacacttag
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integrated database retrieval system
