Cucurbita pepo subsp. pepo (vegetable marrow): 111801929
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Entry
111801929 CDS
T05351
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpep03000
]
111801929
Transcription factors [BR:
cpep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111801929
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
111801929
NCBI-ProteinID:
XP_023541938
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Position
LG09:4503021..4506692
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AA seq
634 aa
AA seq
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MAASSSSVPLFGSRDEAQMRQQQQQQQQQQQQQQQQSNSSGVAPPKKKRNQPGTPNPDAE
VIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEPKRKVYLCPE
PTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRC
DCGTLFSRRDSFITHRAFCDALAQESARHPTNLGSAMGGHLYGGNSNVGLTLSQVPQMSS
LQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLNDQTS
QNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGDSTT
NMNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGGASNIFSMMGDQMN
SGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGSSST
SGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGNSTGGLFGGGMSSFGTFDGGNNRP
NNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRSMSSGGGGGGGGGGGGGGYSQR
EHKQPPQGIVMEGNESNSAASSQAFGGGGNGNYQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcttcttcatccgttccacttttcggatctcgggatgaagcccagatgaga
caacaacagcagcaacagcaacaacagcagcaacaacaacaacagcaatctaattcttcg
ggtgtggcgccaccgaagaaaaagaggaaccaaccaggaacaccgaatccagatgcggag
gtgattgctttgagtccaaagacactaatggcaaccaatagattcatatgtgaagtatgc
aacaaagggtttcaaagagagcaaaatctacaacttcatagaagaggacacaatttgcct
tggaagttaaagcaaaaaagcaataaagagccaaaaaggaaggtgtatttatgcccagaa
cccacatgcgtccatcacgacccatcaagagctcttggtgacttaacaggtatcaaaaaa
cattactccagaaagcatggggagaagaaatggaagtgcgataagtgctctaaacgctat
gccgttcagtctgattggaaggcccattccaagacctgtggtactcgcgagtatcgctgc
gattgtggcactcttttctccagacgggatagttttattacacatagagcgttttgtgat
gcattggcacaagaaagtgcaagacatcctacaaatttagggtcagcaatgggaggccat
ttatatggaggtaatagcaatgtggggttgacattatcacaagttcctcaaatgtcatct
cttcaagatattcccaatataacccaatcggacgtcctccgtcttggcggtggaggacga
accgggcagttcaatcatcttcttcctccgtctatcggttcgtcgtttcgaccaccaccg
caacaggcaatgccgtcttcggctgcggctgcggcgttcttcttgaatgatcaaactagc
cagaatagcttccatgaggatcatggaagtcaatctcaacaagggttgtttggaaacaag
gcgtttcatggattaatgcaattttctgatatgcaaagtcatacgagtaatagtaacaac
ccttcctcaaatctcttcaatttggggttcatttcgaacccgacgggtgatagtacgacg
aatatgaacaacaacaacaacaccaacagtaataatacgagtaatagcaacaacaacagc
aacagcaacaacaacaatcttcaatcgtctttgcttaatcaattcaatggcacgaacaat
ggcaacaatgaaggtggtggtgcatcaaacattttctcaatgatgggtgatcaaatgaat
tcaggtgcagtcccgtctctctatagcaacacgacgggagtcggtggtagcggtacgagc
ggagcaattccacacatgtcagcaacggcgcttctccaaaaggcagctcaattaggctca
acaacgtcaagtagcaacacaacagcgacattgctaagatcatttggaagctcgtcaact
tcaggtgggaaagcatccgataggacgcttttcccaccgagctacggcggagtattcggt
gaaaatgagagcaatcttcaagatctaatgaactcattcaccaccggaaactcaaccggt
gggctcttcggtggcgggatgagctcattcggtacattcgacggcggaaacaatagacca
aacaacatggaaacattggaagatccgaaattacaacagaatctaagctcagttagcatg
ggaggaacagatagattaacaagagacttcctaggcgttggacaaattgtaagaagtatg
agtagcggaggaggaggaggaggaggaggaggcggcggtggcggcggttattcgcaacga
gaacataaacaaccgccgcaagggatcgttatggagggaaatgagagcaattcagctgca
tcaagccaagcatttggtggtggaggaaatggaaactaccagtga
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