Chlorobium phaeobacteroides DSM 266: Cpha266_0552
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Entry
Cpha266_0552 CDS
T00439
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cph
Chlorobium phaeobacteroides DSM 266
Pathway
cph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cpha266_0552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cph03019
]
Cpha266_0552
03016 Transfer RNA biogenesis [BR:
cph03016
]
Cpha266_0552
Enzymes [BR:
cph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Cpha266_0552
Messenger RNA biogenesis [BR:
cph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Cpha266_0552
Transfer RNA biogenesis [BR:
cph03016
]
Prokaryotic type
tRNA degradation factors
Cpha266_0552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH_2
KhpA-B_KH
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABL64608
UniProt:
A1BDY1
LinkDB
All DBs
Position
complement(615226..617424)
Genome browser
AA seq
732 aa
AA seq
DB search
MIINKAIDLGKGKILSIETGKMAKQADGAALVRLGDTMVLATVVSSKTPPPANQDYFPLQ
VEYREKYSAAGKFPGGFFKREGRPSEKEILTARLIDRALRPLFPDGYLFETQIIVTVFSS
DQINDADVLGGVAASAAIMVSDIPFHNSMSEVRVGRINGEFIVNPNINELQGSDIDICIG
GTANTICMLEGEMKEISEAEMLDAIKFGHEAIRKICALQDEMAAEIARPQRSFAPVKAPA
KLKEVIAGLSETRLKELAYTPLCKEDRAEKTASVYKETLQSTLELFKALLTPEEIAAEPE
KALCLNAHIIEEEIHAVEKKVMRHMILDDGKRLDGRTLDEIRPISIELGIIPRAHGSALF
TRGETQALVTITLGTKKDAQSVDTLTDSADKRFMLHYNFPPFSVGETGRVGGTGRREIGH
GNLAERSIKMVSPSETDFPYTIRIVSDILESNGSSSMASVCGGTLALMDGGVPIRKPVSG
IAMGLIKEGDAYSVLSDILGNEDHLGDMDFKVAGTEDGITACQMDIKIDGLDYHILETAL
EQARKGRLHILDKMEVAIPISRGELAQYAPRLTSIQIPVDAIGLIIGKGGETIRSITEET
GAEINIEDDGTVTIACSSPEGTNAAVETIKTLISKPEIGNTYLGKVRDIRDELGAFVEFL
PKTDGLVHISEISKERVTKVSDHLKVGDRVKVKLVDIRKDPRTGKNRFALSIKAVESEPE
KSDENKAGTEGN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgattatcaacaaagcaattgatcttggcaagggcaagatactctcgatcgaaaccggt
aaaatggcaaaacaggccgatggcgccgcccttgtacgccttggtgataccatggtgctc
gccacggttgtatcaagtaaaactcctcctcctgccaatcaggactattttccgcttcag
gtcgagtaccgcgaaaaatactccgctgcgggtaaattccctggcggtttttttaaacgt
gaaggacgcccttccgaaaaagaaattctcacggcccgacttatcgacagagcactcaga
ccgctcttccccgacggttacttatttgaaacgcagatcatcgtcacggtattctcttca
gaccagatcaacgatgccgacgtccttggcggcgttgccgcctcggcggcaatcatggtt
tccgacattcctttccataactcgatgtcggaagtccgtgtgggaagaatcaatggagag
ttcattgtcaacccgaatatcaacgaactgcagggaagcgacatcgatatctgtatcggt
ggcacagccaacaccatctgcatgcttgaaggcgaaatgaaggagatctctgaagccgag
atgcttgacgccataaaattcggccacgaagcaattcgtaaaatctgcgcgctgcaggac
gaaatggctgctgaaatagcaaggccccaacgctcttttgctccggtaaaagcaccggca
aaactcaaagaggttattgccggcctttccgaaacccggctgaaggaacttgcctatact
ccactctgcaaggaagatcgtgccgaaaaaaccgcttccgtctataaagagactctccag
tcaacgcttgagctcttcaaagctcttctgacacctgaagaaattgcagcagaacctgaa
aaggcactctgtctgaacgcacatatcatcgaggaggagatccacgctgtcgagaaaaaa
gttatgcgacacatgattcttgatgacggcaaacggcttgacggaagaacccttgacgaa
attcgccctatcagcattgaactcggcatcattccgagagcacacggctcagccctgttc
accagaggggaaacccaggcactcgtcaccattacgcttggcacaaaaaaagatgcgcag
tcggttgacaccctaacagacagtgccgacaagcgcttcatgctgcactataactttccg
ccattttccgttggtgaaaccggcagggtcggaggaacgggccgcagagagattggacac
ggaaaccttgccgaacgttcaatcaaaatggtctccccatcagaaaccgatttcccctat
accatccgcatcgtttctgatattcttgaatcaaacggctcatcatcaatggcttcggta
tgcggcggaaccctggccctgatggatggcggcgttccgataagaaaaccggtctccgga
atcgccatgggactgatcaaggaaggagatgcctacagcgtgctttccgatattctgggc
aacgaagatcatcttggcgatatggatttcaaggtggctggtacagaagacggcatcacc
gcatgccagatggatatcaagattgacggccttgactaccacatcctcgaaaccgctctg
gaacaggcacgcaaaggcagactgcatattctcgacaaaatggaagttgccataccgata
tcacgcggcgaacttgcacaatatgcgcctcgactcacctccatacagattccggttgat
gccatcggactgattatcggtaaaggaggagaaaccattcgcagcattactgaagagacc
ggcgcagagatcaatattgaggatgacggcaccgttaccattgcctgttcgagcccggaa
ggcaccaatgccgcagttgagaccatcaaaacgctcatctccaaacccgaaatcggcaat
acctaccttggcaaggttcgcgacattcgcgacgaactcggcgcctttgtagagtttctg
cctaaaaccgacggactggttcacatttcggaaatatcgaaagaacgggttacaaaggtc
agcgatcaccttaaagtcggagacagagtcaaagtcaaactcgttgacatccgtaaagac
ccgcgtaccggaaaaaaccgctttgcgctctccataaaagcagtggaatcggaaccggaa
aaatccgacgagaacaaggctggcacagaaggaaactga
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