Chitinophaga pinensis: Cpin_5315
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Entry
Cpin_5315 CDS
T00959
Name
(GenBank) TonB-dependent receptor plug
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
cpi
Chitinophaga pinensis
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpi02000
]
Cpin_5315
Transporters [BR:
cpi02000
]
Other transporters
Pores ion channels [TC:
1
]
Cpin_5315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
CarbopepD_reg_2
CarboxypepD_reg
VirB7
Motif
Other DBs
NCBI-ProteinID:
ACU62746
UniProt:
A0A979G8M6
LinkDB
All DBs
Position
complement(6786556..6789675)
Genome browser
AA seq
1039 aa
AA seq
DB search
MKKVLLLITWLSGMAPVTLYAQQTVSDPVINSTLTGTVIDSKTQTPIIGALVRIKGTTNQ
VLTDAKGNFSFKTGQKLPYILEAAFIGYKKQEIKAEKSPLQIILQETESQLNEVVVVGYG
TQRKSDITGSVASVSKVLLAQPAAAFDNLLQGSVPGVAVTQSSGQPGSTATIRIRGGNSI
SFGNAPLYVIDGFIIYNNNDYANTGASNGTGVNALSTINPSDIASVEVLKDASATAIYGS
RGANGVIIITTKRGRRGHDEISYNTYVGTQQVRKKLDLLNATQWGELINDINVSTNSPKT
YTAEQLAALGEGSDWQSAALRKKALQNHELSFSGGDEKSRYLISANYFDQGGIIVNTGFK
RYSGRVNYERSVGDKLKIATNIFGSQSIEDKLYGNGYNSLNFQSTAFANLLQVSPVAKIW
NEDGTYNTSSPYSANPTNPIQDFQSTINKTYLRRILANTSLEYKLFRELTLKVTGGADLI
NTKQNYYSPSYAGSPGGSASGYAAGGYAAVGNLSATTWINENTLTYDHSINEEHFLNILA
GYTMQHQMDESAVASAQKFPNDLTSFNNLNFASTPVLSVSDGHESALNSYLARVNYSYQH
KYNVTVSLRSDGSSRLGRNNRWGYFPSIGFSWNASKETFAQRWEPTLSDLKVRLSAGRTG
NSEVPPYSSLAALSPTNYYFNGALVTGIAPVQIENPDLKWETTTQYNAGLDFGILHKRVN
VSVDAYYKKTTDLLLNVPFALYTGYASVLQNVGSVENKGIELSITSDNIKTADFSWKSTL
VLGANRNKVLGLGDGTDYYFPLAPTGYVSPVIVKVGLPVGSFWGYNTNGLITKEDLVKGI
PVLSGVSQQAGDTRYVDTNSDGVISTADKHDLGSAQPKLTFGLTNTLNYKAFDLSFVFQG
SHGNKIFNFLQQKLEIPTLSLNASATLLDRYSESNPNGKVARATNAPVAQVTDRYIEDGS
FVKLKNLSLGYNLPKSVLERIHVNQLRIYVTAQNILTWTNYTGLDPEVNFFDSDNTKQGI
DYGAYPASKSYLVGLGVTF
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagttctcttgctcatcacctggctttcagggatggcacctgtaacgttatac
gcacaacaaaccgtctcagaccctgtaattaattctacactcactggcactgtcatagac
agcaaaacacagacgccgatcatcggcgcattggtacgcattaaaggtaccaccaaccag
gtattaactgatgcgaagggaaacttctcttttaaaacgggacagaaactgccatatatt
ctcgaagcagctttcattgggtataaaaaacaggagatcaaagcagaaaagtctcctttg
cagatcatattacaggaaacggagagtcagttgaacgaggtggtagtagtaggatatggt
acacaacgtaaaagtgatatcaccggttctgtagccagtgtatctaaagtattactggcg
caacctgctgccgcatttgataatctgttacagggaagcgtacctggtgtggcggttaca
caaagttcgggacaaccgggaagtacggcaaccatccgtatcaggggaggaaattctatc
agtttcgggaatgctcctttatatgttatcgacggatttattatctacaataataatgat
tacgctaatacaggcgcatccaatggtacaggggtcaacgcattatccactatcaatcca
agtgatatcgcttctgtggaagtattgaaagatgcttctgccacagccatctacggatca
cgtggcgctaacggtgttatcatcatcaccacaaaaagaggtcgtagaggacatgatgaa
atcagctataatacctacgtcggcacacaacaggtaagaaagaaactggatctgcttaac
gctacacaatggggggagctgatcaatgatatcaatgtcagtacaaacagtcctaaaaca
tatactgcggaacagctggcagcattaggggaaggctccgactggcagtccgctgcattg
cggaagaaagcattgcagaaccacgaactgtctttctccggtggtgacgagaagtcaaga
taccttatctccgccaactactttgatcagggtggtattatcgttaataccggttttaaa
cgttactccggacgtgtcaattatgagcgttctgtaggtgataaactgaagattgctacc
aatatttttggtagtcagtcgatagaagataaactatatggtaatggctacaatagcctg
aatttccagagtaccgcttttgccaatctgttacaggtatcgccggtggcaaagatctgg
aatgaagacgggacttataataccagcagtccttattcggcaaatccgaccaacccgata
caggattttcaatctaccatcaacaaaacttatctgagaaggatactggcgaatacttca
ctggaatacaagctattcagggaactcaccctgaaagtaacgggcggcgcagatctgatc
aatacaaaacaaaactattattctcccagttatgcgggttcccccgggggaagtgccagt
ggttatgcagcaggtggttatgccgctgtaggtaatctgagtgcgaccacctggatcaat
gagaacacgctgacctacgaccattcaatcaatgaggaacattttctgaacatactggcc
ggttacaccatgcaacaccagatggatgaatcggcagtggccagtgcccagaaatttccg
aatgatctgacatcattcaataacctgaacttcgccagtacacctgtattgtcagtgtct
gatggacatgagtctgccctgaattcctatctcgcaagggtgaattattcctatcagcat
aaatataatgtaaccgtttcgcttcgttcggacggttcttccaggctgggaagaaacaat
cgctgggggtactttccctccattggattctcatggaatgccagcaaagaaacattcgcc
caacgctgggaaccgacacttagtgacctgaaagtaagactttctgcaggtcggacaggt
aactcggaagtaccgccttatagttcgctggcggccttatcacctaccaactattatttc
aatggcgcattggttacaggtatcgcaccagtacagatagagaacccggatctgaaatgg
gagacgactacgcagtataacgccggactggatttcggtattctgcataaaagggtgaat
gtctcggtggatgcttattacaaaaagacgactgaccttttactgaatgtaccatttgcc
ctgtataccggttatgccagcgtattacagaatgtgggcagcgtagagaacaaagggatt
gaactgagcattacttcagataatattaaaactgcagacttcagctggaaatctaccctc
gtactgggcgctaacaggaacaaggtattaggattgggagacggtacggactactatttt
cctttagcacccacaggctatgtctctccggtgattgtgaaagtcggtttacccgtaggt
agtttctggggctacaatacaaatggtctgatcacgaaggaagacctggtaaagggtatt
ccggtattatccggcgtatcgcaacaggcaggggataccaggtatgttgatacgaatagc
gatggtgtaatcagtacggcagataaacatgatcttggcagcgcgcagcctaagctgact
ttcggcctgaccaatacattgaactataaggcctttgatctctcgtttgtattccaggga
agccatggtaataagatcttcaacttcctgcaacagaaactggaaatcccgacattatca
ctgaatgcatctgcaaccttgctggacaggtacagtgaaagtaatccgaacggtaaagtg
gcccgtgcaaccaatgcaccggtggcacaggtaacagaccgctatatagaagacggctcc
tttgtaaaactgaaaaacctgtcgctcggatataatctgcctaaatcggtactggaaagg
atccatgtcaaccagttacgcatttatgtcactgcacagaatatcctgacctggaccaac
tacacagggctggatccggaggtgaacttctttgatagcgacaataccaagcagggtatt
gattatggcgcctatcctgcttcgaaaagttatctcgtcggattgggtgtaaccttctga
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