Cryptosporidium parvum: cgd7_820
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Entry
cgd7_820 CDS
T00168
Name
(RefSeq) RAD3'DEXDc+HELICc protein'
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cpv
Cryptosporidium parvum
Pathway
cpv03022
Basal transcription factors
cpv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
cgd7_820
09124 Replication and repair
03420 Nucleotide excision repair
cgd7_820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpv03021
]
cgd7_820
03400 DNA repair and recombination proteins [BR:
cpv03400
]
cgd7_820
Enzymes [BR:
cpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
cgd7_820
Transcription machinery [BR:
cpv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
cgd7_820
DNA repair and recombination proteins [BR:
cpv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
cgd7_820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
ResIII
DEAD
AAA_11
Motif
Other DBs
NCBI-GeneID:
3372163
NCBI-ProteinID:
XP_628271
ApiDB_CryptoDB:
cgd7_820
UniProt:
Q5CYV9
LinkDB
All DBs
Position
7:complement(190682..193207)
Genome browser
AA seq
841 aa
AA seq
DB search
MVRFFIEELEVFFPYDNVYPEQLEYMKYLKQILDAHSHGVLEMPTGTGKTVTLLSFITSY
QLVHPNMGKLIYCTRTVAEMEKALQELKTVVDYCKKEIENDKIKLEQEIKSENNSSLASV
SESRFSAASILGIGMTARRNMCINPRVSVHADRDKIDSMCRSMTAPWVRAKHQMEARERS
ALSEGDANSSKMTEIADIEEMLESGCTTLCPYYEAYERVWSSDLVPTGIYTIDEFKDFSK
NWEHPILGKKIQFCPYFASKRLIQTAKVVVLNYQYILDPKVAQASLLGGGTVSQGFSHGA
NPNGLSLGSKFAASLLPEQEGTKEPSVVVFDEAHNIDNVCIEALSVNMNRQILSGAARNL
RTLKSEIESLSSLDEQRLQDEYTRLIQGLRNSGQVQDEAVLEDLERFPVLPEEMEKIKKG
LIPGSIRRAEHFITIMKKLILYLQEYIRVYSTRIEGPLTFVKHIEASCYIQSGLLKFCDE
RLRSLLNTLRIVDSDQYSSLELVCTFFTILGSYSKGFIVIVDPYPEVSGLYDPVIQLSCL
DSSIAMRPILKRYQSIVLTSGTLSPLDLYPKLLGFIPVVSQSLTMTLDRTCICPLIVTRG
SDQTPLSSKFESRADVSIQQNYGKLILEITKKVPDGVVCFFSSYLYMEQMLSQWYESGLL
AQIMEHKLVFVETKDIVSTTLALHHYRKACDIGRGAIFFSIARGKVAEGIDFDRHYGRCV
VMVGIPYQYTLSKILQSRLSFLKENYGIQENEFLTFDAMRQASQCVGRVIRSKADYGLMI
FADLRYNKKDKREKIPPWILKHLKPEYSTLSTDMAVSISSNFLKQMSQPYAVSNSIIKLG
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggttcggttttttattgaggaattggaagttttctttccatatgataatgtctaccct
gaacaacttgagtatatgaagtacttgaagcagattctagatgctcacagccatggagtt
cttgaaatgcctacaggtactggtaaaacggtaaccttattatcttttatcacgtcttat
cagttggttcatcccaatatgggtaagttaatttattgcactcgtactgtggctgaaatg
gaaaaggcactacaggagcttaaaacagttgttgattattgtaagaaggaaatagaaaat
gataagattaagttagagcaagaaataaagagtgaaaacaattcctctcttgcgtcagtc
tctgagtctcgttttagtgctgcttccatactgggaattggtatgactgctagaagaaac
atgtgtatcaatcctagagtatcggtacatgctgacagagacaagattgattctatgtgt
agatcaatgacagctccttgggtaagagcaaaacatcagatggaagcaagagaaagaagt
gctttgagtgagggggatgcaaattcttcaaaaatgacagaaatcgccgatattgaagaa
atgttggagtctggatgtacaactttatgtccatactatgaagcttatgaaagggtatgg
agcagtgatcttgttcctacagggatttacactattgatgaatttaaagactttagtaag
aactgggaacatccaattttgggaaagaaaatccaattttgcccatactttgcttctaaa
aggctcattcaaactgctaaagttgtcgtacttaattaccaatatattctagatccaaag
gttgctcaggcctctctcttaggaggtggaacagtatctcaaggattcagccatggagca
aatccaaatggacttagtcttgggtccaaatttgcagcttctcttcttccggagcaagaa
ggaaccaaagagcctagtgttgttgtatttgatgaagcacacaatatagataacgtttgt
attgaagctttatctgtcaatatgaatagacaaatcctaagcggcgctgcacgtaactta
agaactttgaaatcagaaatcgaaagtctctcttcattagatgaacagaggctacaagat
gaatatacaagattaatacagggtcttagaaactctggacaagttcaggatgaagcagta
ttagaggatcttgaaaggtttcctgtacttccagaggaaatggaaaagattaaaaaaggt
ttaattcctggatcaattagaagagctgaacactttattacaattatgaagaaacttatt
ctgtatttgcaggagtatattcgagtatattcaactagaattgaaggacctctgacattt
gtcaaacatattgaagcttcctgctatattcagtctggactactaaagttctgtgatgaa
agacttagatctctgttgaatactttaagaatagtagacagtgatcaatattcttctctt
gaattagtttgtacattctttacaattttaggaagttattcaaaaggatttattgtgatt
gtggatccttatcctgaggtttctggactttatgacccagtaatacaattaagctgttta
gattcatctattgctatgaggccaattttaaagcgttaccagagtattgttctaacatca
ggaactctttctcctttggacctttatccaaaactattaggatttattcctgttgttagc
caaagtctaacaatgactttagataggacatgcatttgtccattgattgttacaagagga
tcagatcagacacctctttcatcaaaattcgagtccagagctgacgtttcaattcaacag
aattatggtaaacttattttagaaattacaaaaaaagtcccagatggggtagtttgcttc
ttttcttcatacttgtatatggagcaaatgctttctcaatggtatgaatctggtttattg
gcacaaattatggagcataagctagtatttgtagaaactaaggatattgtatctactact
ttagctttacatcattatagaaaagcatgcgatattggaagaggagctatattcttttct
attgctcgtggaaaagttgctgagggaatcgattttgatagacattatgggaggtgtgtc
gtaatggttggaattccataccagtatacattatcaaagattctccagtcaagacttagc
tttctaaaggagaattacggaattcaggaaaacgaattccttacatttgatgcaatgagg
caagcatctcagtgtgttgggcgtgttattaggtcaaaggcagattatggacttatgatt
tttgctgatttaaggtataataaaaaagacaagagggaaaagattcctccttggatttta
aaacatttaaagcctgaatattcaactttatctacggatatggcagtttcaatttcttca
aattttttaaaacaaatgtcacaaccttatgctgttagtaactcaattattaagttgggt
tcttag
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