Crassostrea gigas (Pacific oyster): 105330610
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Entry
105330610 CDS
T03920
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
crg
Crassostrea gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105330610
Membrane trafficking [BR:
crg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
105330610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
RGS-like
PDZ
PDZ_6
C1_1
PDZ_2
PH_13
RGS
PH
Tricorn_PDZ
PHD
zf-RING-like
PH_11
PH_6
Motif
Other DBs
NCBI-GeneID:
105330610
NCBI-ProteinID:
XP_011430696
LinkDB
All DBs
Position
LG7:complement(37726332..37792203)
Genome browser
AA seq
1885 aa
AA seq
DB search
MPLGKKWRSMDVLHFGSSKQDKEALKKENGHLGSGDLLSKTCRTKSKGGSKEDLLDEEPP
VILRRKHGSKHRFSSREDLLDKPASPKLRQSIHVPWHRSKSSSRDDLVNNESRKDPNNRH
SSSVKGEHGTQEETKEGYIQRCVIIQKDDKGYGLTVRGDNPVYVESVKADGAAERAGVRQ
GDRICKVNGTQVTNSNHIEVVRLIKAGSFVALTLMNKAPEKVTKPIPVDSRKSRELQASK
LFEIKKYYDNATEELQRTKSQLQNNPSDDKLASKVKEQEALVKKLEDQLKVLSSTLNSSQ
NNAQAAEETSPDIGNGDGSVAPWLPEGPKHKKSGSTPIDFTPNPRELRAISRSKSDASSR
VTFRKPSTSQKRQPGDISPEHVLFSSRPSRRRPVFGIRQAIVAPASDGSSVSDSPTTSPN
ASPTPTHPNNSEDTQSVQKKELEYDEISQTSQASIGQPQKPIIAAEEDEFSSDEDMQNKV
TANGRPPSLSTTPLNARSQAESDDFGPFNDLRQLEGKPAHMSVFLNFVLKHQSPGGALLF
YITTNVYQQAKGNIKDMQKWAFEIFSTFLANGAPLKVEVDPVLVERIDEILNSKSSEKDD
VLRTVFNGARNYVQAEISNSLQEFRSKLCLGFGNMYGLNNLAPNMRQKDETEAVLKLLSP
YFDTVPQLDEDSKPDTSHAIGWALATFLRHNSMVDKKHSSMERVQSFVAKDKKKILMQRK
RTLTQKGHTFQPQHFSRVENCLFCKELIWGVGIQGYQCSNCEQWIHKYCLDSLEEQCPKK
KKNRPPSSVFNIPRPHADRHSTSSIEQILSRSVFHVPLALTVSEASSPGPVTPTTFNIQP
VRDEREDDKVTPMHTVDSLIKRYDKAPSEGPGDRNKSPSVEEMTNKKSTEISRSESLKGR
QDQKGRVKQRRVKSDVEIDDNLMKALQGNTPNSHSSSSSSVRDLMKDILVVPSLKARSGE
SPSSSMDAVNNIPHTIENDSDFEVENELPPLDSIYPRDVYKRLRPKDRKRLEVINELFYT
ERTHCRNLKILQNLFYKPMSQDPNISNELIKVLFPNLEEMITLHSSMNCAMKERKKQNSV
VIEVGDILLARFETEGEAFRNGCATFCQNQSYALDLLRAKQRKDNKLANFLNEAESSPLM
RRLQLRDLIPTQMMRLTKYPLLIENLMKYTQTSTEEYSRLERALKLSRSILAYVNQAVKD
CENRNKLRILQRKVDKKQMDSPEFKELDLTKHKLMLDGTLTWNINQRKSVDCHVVLLEDL
LVLFQKQDDKLVLRQQSTQLVAGKEDSRYQFSPLLKLENVLHTNSKATDKKAFFVVSKTQ
IYELSASSTEEQKKWIRHIKEAAESYKKRKDKAQEPAQTDVLAVEPPQIIRRPSAERTAE
EDYEEDIIQPDEITVQNPLSQKAEPVLTPLEKIRRLDETVQEHLQEKTVLVAEVLNIPTA
EVPQRLQMVEEMPENADTSDNLLALIEQTQQCLVLLNNAESGLAEKDLKMPIPMEKLREM
ANRMNQILTNLLEKTRQYAALNAGQSPASSSAVVNSRDDERERLRLELKAAQDELNMLRE
IQRRVSGSNVMSLAPTQGRPQSFISDTSSYSDTEAVANTEEDDMQDVQSDHNEGEVDTID
VPDDFDVDPEATEPEVSQPTNLPKEIAESDTQSLTEIEPPVEEFMEEPEPPSVPEEALTG
AEDTKSEETEEEVQVKDGVQKAEINLIEEVTEEVTEFPSNQKDVVHSEESDTECKDMRKE
EQSADAPPTENSCEDRGGLSEEKKAEEERRFSNDDYVDAVETQSEIREGVQERTNNEEET
SEKTKEEITDQEKTDVGKEGVESDPETADKQPQEEVTEEDSENSQIIEDKPMEKSEEKIL
DNDDNENHVESTNTTDNRGDSGSPV
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgccattggggaagaaatggcgatcgatggacgttcttcactttggttcatccaaacaa
gataaagaggccctgaaaaaagagaacggacatttgggatcgggggacttactgtccaaa
acatgtcggacaaagagtaagggtgggtcaaaagaagacctgttagacgaagaaccgccg
gtcattttgagaaggaagcacggttcgaagcatcggtttagctctcgagaagatctattg
gataagccggcctcccccaaactgcgacaaagcattcacgtcccctggcataggtctaaa
tctagctccagggacgacttggtcaataacgaatcaaggaaagaccccaacaacaggcac
tctagtagtgtgaaaggggagcatggcacacaagaagaaaccaaagaaggttatattcag
aggtgtgtcatcatacagaaagatgataagggctatgggctcactgtcaggggagataac
ccagtttatgtggagtcagtcaaagcagatggggcggcggagcgggcaggagtcagacag
ggggacaggatttgtaaggtgaatgggacccaggtaaccaactcaaatcacatcgaagtc
gtgagactcatcaaagctggatcctttgtggcgctgacacttatgaacaaagcccctgaa
aaagtcacaaaaccaattccagttgattccagaaaaagtcgagaactccaggcatctaaa
ctctttgaaatcaagaagtattatgataatgccacagaggaattacagagaacaaaatca
caactgcagaacaatccatcagatgacaaactagcttccaaagtcaaagaacaagaagct
ctagttaaaaaacttgaagatcaattaaaggttcttagttctaccttaaactctagtcaa
aataatgcgcaagccgcggaagaaactagtcctgacataggaaatggcgatggctcagta
gcaccttggctgccagagggtcccaaacataaaaagtctgggtccactccgatcgacttt
acacctaaccccagagagttaagggcaatatctcgctctaagtctgacgcgagcagccgg
gttacgtttcgaaagccttcgacatcccagaaacgtcagccaggggacataagtccagag
catgtgttgtttagctctagaccgtctagacggcgtccagtgtttggaataagacaggcc
atagtggctccggcgtctgatggtagcagtgtgtctgactccccaaccacctcccccaac
gcctcccccacccccacacaccccaataactcagaagacacgcagtccgtccaaaagaaa
gagctggagtacgatgaaataagtcagaccagtcaagcttccattggtcaaccacaaaag
ccgatcattgccgctgaagaggacgaattcagctctgatgaagacatgcaaaacaaggtg
acagccaatgggagaccaccgtctctgtccactacaccccttaatgccaggtctcaggca
gagtcagatgatttcgggcctttcaacgacttgcggcagctggaaggcaagccggcccat
atgtctgtgttcctcaactttgtcctgaaacatcagtctcctggtggtgcactgttattc
tacatcacaacaaatgtgtaccagcaagcaaaaggaaacattaaggatatgcagaagtgg
gcttttgagattttctcaacgtttcttgcaaatggagcgccattgaaggttgaagttgac
ccagtcctcgtggaaaggatagatgaaatcctcaatagcaaatcatcagagaaagacgac
gtcttgaggaccgtgttcaatggagcgcgtaattatgtccaggctgagatctcaaacagt
ttgcaggaattccgcagcaaactatgtctaggttttggaaacatgtatggtctgaataat
cttgcaccaaatatgaggcaaaaggacgaaacagaagcagtgttaaagttactgtctcca
tactttgatacagtcccacaactagatgaagatagcaaaccagacacaagccatgctata
ggatgggctttagcaacattcctcaggcacaactccatggtggataaaaagcactcctca
atggagagagttcagagttttgtggcaaaagacaagaagaaaattctcatgcagaggaaa
aggacgctgacacaaaaaggacacacttttcagccccagcatttttctcgtgtggagaac
tgcctgttttgtaaggagttgatctggggggtaggcatccagggataccagtgttctaat
tgtgaacaatggatacataaatactgtttagactctttagaagagcagtgtccaaaaaag
aagaagaatcggcctccctcgtctgtgttcaatattccaagaccacatgcagacagacat
tccacctctagcatagaacaaatactaagtcgatcagtgttccatgtgccactggctttg
acagtgtctgaagcttccagtcccggcccagtcaccccgaccacgttcaatatacagccg
gtcagggacgagcgggaggatgacaaagtcacacctatgcatacagtggattccttgatc
aaaagatacgacaaagcaccatcagagggacccggtgaccgcaacaagagcccgagcgtg
gaggaaatgaccaataagaaatccaccgagatcagtcgatccgaaagtttaaagggtcgg
caagaccagaaaggcagagttaaacagcgtcgcgttaaaagtgatgtggagatagacgat
aacttgatgaaggccctccaagggaacacgcccaactctcacagctcctcatcctctagt
gtcagggatcttatgaaagacattcttgttgttccctcgctgaaggccaggagtggtgaa
agtccaagtagttcaatggatgccgtcaataatatcccccacacgatagagaacgattca
gactttgaagtggaaaatgaattacctcccctagactctatttatcctagggatgtttac
aaaagattgagaccaaaagataggaaacgattagaagtaattaatgaattgttttacacg
gagagaacacattgtcgtaatttaaaaatattacagaatttattttataaacctatgtcc
caggacccaaatatatccaatgaattgattaaagtactgttccctaacctagaagagatg
atcacattacatagttcaatgaactgtgcaatgaaagagaggaagaaacaaaattcagta
gtaattgaggttggggatattttattggctcggtttgagactgagggagaagcattccgt
aatggctgtgccacattttgtcagaaccagtcatatgccctcgatctgctgagggcaaaa
cagagaaaagacaataaactggccaactttttaaatgaagcagaaagtagtccgttaatg
cgtcggctacagttacgagacttgattcctacacagatgatgcgtctcaccaagtatccg
ttgctgattgaaaatcttatgaaatatactcagacttcaacagaggagtattctcggctg
gaacgagccctcaagttgagtagaagtattttagcatatgtaaatcaggcagtgaaagac
tgtgaaaacaggaataagttgaggattctgcagcggaaagttgacaaaaaacagatggac
agtcctgaatttaaggaattggatctcactaaacacaagcttatgctggacggcacgtta
acctggaacattaaccagaggaagtcagtggactgccatgttgtgttgttagaggactta
ttagtgctatttcagaaacaggacgataaactagttctcaggcaacagtccactcaactg
gtggccggtaaagaggacagtcgctatcagtttagtccactgcttaagttggaaaatgtc
cttcacaccaacagcaaagcaaccgataaaaaggcattttttgtggtatctaaaactcag
atttatgaactttctgcatcgtccacagaggaacagaaaaaatggattagacatatcaag
gaagcagctgagtcatacaagaagaggaaggacaaggcccaggagccagcccagacagat
gtgctggcagtggagccccctcagatcatccgcaggcctagtgctgagaggacagcggag
gaggattatgaggaagatatcatccaaccagatgaaatcactgtacagaatccgttatct
cagaaagccgagcctgttctaactccgctagagaagatccggcgcctcgacgagacggta
caggagcacctgcaggagaagacggtgctagtggcggaggtcctcaatatccccacggcc
gaggtcccccagcgccttcagatggtggaggagatgccggagaatgctgacaccagcgac
aacctactggccctcattgagcagacccagcaatgtttggttttgttaaacaatgctgaa
tctggactagcagagaaagatctgaagatgccaattccaatggagaaactacgggaaatg
gccaaccgcatgaaccagattctcaccaatctgctggaaaaaaccagacagtatgcagcg
ctaaatgcggggcaaagccctgcttcttcctcagctgtggtgaatagcagggatgatgag
cgggagcgacttcgcctggagctgaaggctgctcaggacgagctaaacatgctgagggag
atccagaggagggtgtcgggctccaatgtaatgagcctcgcccccacacagggccggcct
cagagctttatttcggacacctcatcatactcggacactgaggctgtagccaatactgag
gaggatgacatgcaagatgttcagtcggatcataatgagggagaagtggacactatagat
gtacctgatgatttcgatgttgaccctgaggccacagaacccgaggtctcccagcctacc
aatctgccaaaggaaattgctgagtctgacacccagtctctgacagagattgagccacct
gtagaggagttcatggaggagccggaacctcccagtgtccctgaggaggcactaaccggt
gccgaggacaccaaatctgaggaaacagaggaggaggtccaagtcaaggatggagttcag
aaggcagagatcaatctcattgaggaggtgacagaagaagtcacggaattcccctccaat
cagaaggatgttgttcattccgaggaaagtgacactgaatgcaaggacatgaggaaggag
gagcaaagtgctgatgctcctcccacagaaaattcatgtgaggaccgaggagggctttca
gaggagaagaaggcggaggaagagagacgtttcagtaacgatgattacgtggatgctgtg
gaaacacaatcagaaatcagggagggtgttcaagaaaggactaataacgaggaggaaact
agtgaaaaaacaaaggaggaaatcacggaccaagagaaaaccgacgtcggaaaagagggg
gtagaatcggatccggaaactgctgacaaacagccacaagaggaggtgactgaggaggac
agtgaaaacagccaaatcattgaggacaaaccgatggaaaagtccgaggagaaaatcctg
gacaacgatgacaatgaaaatcatgtagaatctacaaatacaacagacaacaggggagac
agtggctctcctgtatag
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integrated database retrieval system
