Citrobacter rodentium: ROD_34391
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Entry
ROD_34391 CDS
T01145
Symbol
fecI
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cro
Citrobacter rodentium
Pathway
cro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ROD_34391 (fecI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cro03021
]
ROD_34391 (fecI)
Transcription machinery [BR:
cro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ROD_34391 (fecI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_7
HTH_23
HTH_Tnp_4
HTH_24
HTH_11
GerE
TnsD
HTH_28
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
CBG90153
UniProt:
D2TPW6
LinkDB
All DBs
Position
complement(3628083..3628601)
Genome browser
AA seq
172 aa
AA seq
DB search
MSTSAPCTPHPSETLYRAHHGWLTRWLTRKLQSAFDADDIAQDTFLRVLNGESLATIRDP
KSFLCTVARRVMIDLFRRHALEKTYLNMLAQLPEALAPSAEEKQSQLETLQLIDRMLDGL
GNKARNAFLLSQLDGLTYSDIALRLNVSVSSVKKYVAKATEHCLLFRLEHGL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttccgcgccatgcacacctcatccatctgaaacgctgtatcgcgcgcatcac
ggttggttaacgcgctggctgacgcgtaagcttcagtcagcttttgacgcggatgatatt
gcgcaggatacctttttgcgggtgctcaacggtgaatcgctggccactattcgcgatccg
aaatctttcttatgcaccgtcgcccggcgggtgatgatcgacctgtttcgccgccatgcg
ctggaaaaaacctatctcaatatgctcgcccaactcccggaggcgctggccccttcggcg
gaagagaagcagtcgcaacttgaaacacttcagcttatcgatcgcatgctggacgggctg
ggaaacaaagcgcgaaatgcgttcctgctctctcagctcgacggtctgacctacagcgac
atcgccctacgcctgaacgtctccgtcagttcagtgaaaaagtatgtcgcaaaagccacc
gaacattgcctgctgtttcgcctggagcacgggctgtga
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integrated database retrieval system
