Chromohalobacter salexigens: Csal_1169
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Entry
Csal_1169 CDS
T00347
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
csa
Chromohalobacter salexigens
Pathway
csa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Csal_1169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csa03400
]
Csal_1169
Enzymes [BR:
csa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Csal_1169
DNA repair and recombination proteins [BR:
csa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Csal_1169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABE58525
UniProt:
Q1QYD3
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All DBs
Position
1338401..1342210
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AA seq
1269 aa
AA seq
DB search
MTTFDDAPVAQPQPLVLEHLPLAGHHLIEASAGTGKTFTLAALYVRLVLGPLPGREACDY
PRPLLPPEILVVTFTEAATAELRGRIRARLKEARDWLLAPPEARHDDVLGALLTPLVEAG
QTAVASAAKRLDQAARLMDEAAIFTIHGFCQRMLTRHAFDAGARFGAELLQDGSTLLTRV
VEDYWRCHFYPLAAHWQREIRRRWEGPEALSQALQPLLKDARPQPLWWDGERVEAPASLT
TLLGDAERALAARQALEDSLRQAWDREAIAGCLNEAFSRGALNRNSYKPDELDTRLAAFE
QWLATFEADDGTTDSQGRFWLSQAKLEKATKKGHDVPTHPFFARLDELAETATPFDVLAP
RLLAHARDTVAAMFAAEKRRQGLWEFGDLLQDLDAALDPEAAPEAAWRLAGRIRQALPVA
LIDEFQDTDPLQYRIFSRIYRAPEADADTTTLLMIGDPKQAIYAFRGADIETYLAARRET
PSRFTLTRNFRSSVAMVEAVNRLFARHPTPFGSDEIPFVEVAAKGQKARLCNADGQEVAA
LGAWWPGDERHAKADYQASMASAARAEVQRALEGGWHFVDEKGGQRDVRPADIAILVRKG
SEALAVRRALAEGGIRSVYLSERASVFDTALAFELLQLFEAVAQPRQDARLKAALATRLL
NDNPAALETLLADELAWEREVERFADYHRQWQRRGVLPMLRAVMRDFRVAERMGARDDGE
RALTDLLHLGELAQTVSARLDGEHALLRWWHRALVEGTRQLDAEAVSQRLESDEDLVKVV
TIHKAKGLEYPIVLLPFVCDYRPAEPERGTGLLEWRDPRHGRALVHGADDEQLAAAERAR
LDEDVRLLYVALTRAAHACRLGVAHLGRGRGTSGCLHETALGRLLGCEADDQAHDVRERL
AAALSVEACPAPPGHRLRVRHALPAVASARRFNGGIDDDWWIASYSALIVDARLAPAGEE
ASMTWDAPATLDVEVSREQDPVPRPAVRTLRDFPRGPRPGTFLHGLLEAVDLDRLREPAY
RDELQRLVSTRLHLGGFEPEWAPLLLDWLCTALPTPFPGHAGTEIRLDGLAAWRPELEFW
LPAHQAWSAPLDALVSAFEPLPEPRPRLAPRKLNGMLKGFIDLVFEAEDGRWYVLDWKSN
HLGDAPADYRPEALAEAMVEHRYDLQYVLYVLALHRLLTARLDDYDYDTHMGGACYLFLR
GVDGTPGQGVFQRRPERRLIEALDAWLEGDTGPVEALRATLEESAAPRAQRHDIEAAMTQ
ASSATRSSP
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgttcgatgacgccccggtggcgcagccccagccgctggtgctcgagcatctg
ccgctggccggccatcacctgatcgaggccagcgcggggaccggcaagacctttaccctg
gcggcgctctacgtgcgtctggtgctcggtccgttgccggggcgtgaggcgtgtgactat
ccacgtccgctgctgccgccggaaatcctcgtggtgacgttcaccgaagccgccaccgcc
gagctgcgcgggcgcatccgcgcgcgcctcaaggaggcccgcgactggttgctggccccg
cccgaggcccgccacgacgatgtgctcggcgccttgctcacgcccctggtggaggccggg
cagaccgccgtggcaagcgccgccaagcggctcgatcaagccgcgcgactgatggacgaa
gccgccatcttcaccattcacggtttctgccagcgcatgctgacccgtcatgccttcgat
gccggcgcgcgcttcggtgccgagctgctgcaagatggctcgaccttgctgacccgggtg
gtggaggattactggcgttgtcatttctatccgctcgccgcgcattggcagcgcgagatt
cgccgccgctgggaaggcccggaagcgctcagccaggcattgcagccactgctcaaggac
gcacggccgcaacccctgtggtgggacggcgaacgtgtcgaggcccccgcatcgctgacg
acattgctgggcgacgccgagcgcgcgctggcggcacgccaggcgctggaggattcgctg
cgccaggcctgggatcgcgaggccatcgccggttgcctgaacgaggccttctcgcgcggc
gcgctcaacaggaacagctacaagccggacgaactcgatacgcggctggcggcgttcgag
caatggttggcgaccttcgaggccgatgacggcacgaccgacagccagggccgtttctgg
ctgagtcaggccaagctcgagaaggccaccaagaaaggccacgacgtgcccacgcatccg
ttcttcgcccggctggacgaactggcggagaccgccacgcccttcgatgtcctggccccg
cgactgctggcccacgcgcgcgacaccgtggcggcgatgttcgccgccgagaagcgtcgc
caggggttgtgggaattcggcgatctgctgcaggacctggacgccgcactcgaccccgaa
gccgcgccggaggcggcctggcggctggcgggacgcattcgccaggccctgccggtggcg
ctgatcgacgagtttcaggacaccgacccactgcagtaccgcatcttctcgcgtatctat
cgtgcccctgaggccgatgccgacaccaccacgttgttgatgatcggcgatcccaagcag
gcgatctacgcctttcgcggtgccgacatcgagacctatctggcggcgcgccgcgagacc
cccagccgtttcaccctgacgcgcaacttccgctccagcgtggccatggtcgaggcggtc
aaccgcctgttcgcacgacatcccacgccgttcggcagcgacgagattcccttcgtcgag
gtcgcggccaaggggcagaaggcgcgtctttgcaacgccgacgggcaggaggtggcggcg
ttgggtgcctggtggccgggtgacgaacgccatgcgaaggccgactatcaggcgagcatg
gccagcgccgcgcgggccgaggtgcagcgggcgctcgagggcggctggcatttcgtcgac
gagaagggcgggcaacgcgatgtacgcccggcggatatcgcgatcctggtacgcaagggg
agcgaggcgctggcggtacgccgcgcgctggccgagggcggtattcgcagcgtgtatctc
agcgaacgcgccagtgtcttcgataccgcactggccttcgagctgctgcagctcttcgag
gcggtggcgcagccgcgccaggacgcgcgcctcaaggccgccctggcgacgcggttgctc
aacgacaacccggcggcactggagaccttgctcgccgacgagctggcctgggagcgcgag
gtcgagcgcttcgccgactatcaccgccagtggcagcggcgtggcgtgctgccgatgctg
cgcgcggtgatgcgcgatttccgcgtggccgagcgcatgggagcgcgcgacgacggcgag
cgggcgcttaccgacctgctgcatctcggggaactggcgcagacggtgtcggcgcgtctc
gacggcgagcatgcgttgctgcgctggtggcatcgcgcgctcgtcgagggcacccgacaa
ctcgatgccgaggccgtcagtcagcgcctggaaagcgacgaggacctggtcaaggtggtc
accatccacaaggccaagggactcgagtaccccatcgtgctgttgccgttcgtgtgcgat
taccgcccggcggagccggagcgcgggaccggactgctcgaatggcgcgacccccggcat
ggccgcgcgctggtacatggcgccgatgacgagcaactggccgccgccgaacgtgcccgg
ctggatgaagacgtgcggcttctctatgtggcgttgacgcgggccgcgcacgcctgtcgc
ctgggcgtggcgcatctggggcgcggtcgtggcaccagtggttgcctgcacgagacggca
ctgggtcggttgctcggctgcgaggccgacgaccaggcgcatgacgtgcgcgaacgtctc
gcggcggcgctgagtgtcgaggcctgccccgcgccgcccgggcatcgcttgcgcgttcgt
cacgccctgcccgccgtggcgtcggcgcgacgtttcaacggcggcatcgacgacgactgg
tggatcgcctcgtactcggcgttgatcgtcgacgcccgccttgcaccggcgggcgaggag
gcctcgatgacgtgggatgccccggcgaccctggatgtcgaggtcagtcgcgagcaggac
ccggtgccgcgtcctgcggtgcgcaccctgcgcgactttcctcgcggtccgcgtcccggt
accttcttgcacggcttgctggaggcggtggacctcgatcgcctgcgcgagccggcctat
cgcgacgagttgcaacgcctggtcagcacgcgcttgcacctggggggcttcgagcccgaa
tgggcgccgctgctgctcgactggctgtgcacggcattgccgacgcctttcccggggcac
gcggggaccgagattcgtctcgacggcctggcggcctggcgccccgagctggagttctgg
ctgcctgcccaccaggcgtggagcgcgccgctcgacgccctggtctcggccttcgagccc
ttgcccgagccgcgtccccggctggcgccccgcaagctcaacggcatgctcaaggggttc
atcgacctggtgttcgaagccgaggacggccgctggtacgtcctcgactggaaatccaat
catctgggcgatgcgccggcggattatcgtcccgaggccttggccgaggcgatggtcgag
catcgttacgacctgcagtacgtgctgtacgtgctggcattgcaccgtctgctgacggca
cgcctcgacgattacgattacgacacccacatggggggcgcctgttacctgttcctgcgc
ggcgtggacggcacgccggggcagggggtgtttcagcgccgccccgagcgccgcctgatc
gaagcgctggatgcctggctggagggcgacacgggccccgtcgaggcgttgcgtgcgaca
ctggaagagagtgcggcgccacgtgcgcagcggcatgacatcgaggcagccatgacacag
gcatcgtcagcaacccggagcagcccatga
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