Chromohalobacter salexigens: Csal_3240
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Entry
Csal_3240 CDS
T00347
Name
(GenBank) 2',5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
csa
Chromohalobacter salexigens
Brite
KEGG Orthology (KO) [BR:
csa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csa03016
]
Csal_3240
Enzymes [BR:
csa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Csal_3240
Transfer RNA biogenesis [BR:
csa03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Csal_3240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ABE60584
UniProt:
Q1QSH4
LinkDB
All DBs
Position
3612640..3613164
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AA seq
174 aa
AA seq
DB search
MTVSRRLFFALWPDDTTRRALAAEAQRLAPLCGGYPLPAENMHITLAFLGNVDEARIAPL
VALAQAWPALQGEWTLDRLGHFPKPRIVWAGSQASSPELMALDAELWQALARHGFTAPQR
DFTPHVSLVRQADRAAPASRLPTPIRWRFDRLALVESQLDNGGSRYRTLACGVD
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtttctcgccgactcttcttcgccctgtggcccgacgacaccactcgccgggcg
ctggccgccgaggctcagcgcctggcgccactctgcggcggctacccgctgcccgcggag
aacatgcatatcacgctggcgtttctgggcaatgtcgacgaggcccgaatcgccccactc
gtcgccctcgcgcaggcctggccggcgctgcagggcgagtggacgctggatcggctgggg
catttccccaagccccgcatcgtctgggcgggcagccaggcgtcgagtcccgagctgatg
gcgctcgatgccgagctctggcaggcgctggcccgtcatggcttcaccgcgccgcagcgt
gacttcaccccgcatgtcagcctggtgcgccaggccgaccgcgcggcaccggcgtcacgg
ctgcccaccccgatccgctggcgcttcgaccgtctcgccctggtggaatcgcagctcgac
aatggtggctcgcgctatcggacgttggcgtgcggtgtcgattga
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integrated database retrieval system
