KEGG   Chlorocebus sabaeus (green monkey): 103231941Help
Entry
103231941         CDS       T04361                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
Alcoholism
Human papillomavirus infection
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:csab00001]
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    103231941 (HDAC6)
  Substance dependence
   05034 Alcoholism
    103231941 (HDAC6)
  Infectious diseases
   05165 Human papillomavirus infection
    103231941 (HDAC6)
Enzymes [BR:csab01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     103231941 (HDAC6)
Protein phosphatases and associated proteins [BR:csab01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103231941 (HDAC6)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     103231941 (HDAC6)
Chromosome [BR:csab03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     103231941 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
Ensembl: 
LinkDB All DBs
Position
X
AA seq 1257 aa AA seqDB search
MEKKGQGARVPTGRQKLGGASQGRSLRKGLRPNRGRGQASSTMTSTGQDSTTTRQRRSRQ
NPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIAGLQGMDLNL
EAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEK
EELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAV
LGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQ
GTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDAD
YIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKL
ILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSAQASVSCALEALEPFWEVL
VRSTETVEGDNMEEDNVEENEEEGPWEPPLLPILTWPVLQSRTGLVYDQSMMNHCNLWDS
HHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHLRATEKMKTRE
LHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLNGAAVVRPPGHHAEQDAAC
GFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGT
FFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLVS
AGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISESMAACTRSL
LGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVEDREGPSSSKLVTKKAPQP
AKPRLAERMTTREKKVLEAGMGKITSASSGEESTPGQTKSETAVVALTQDQSSEAATGGA
TLAQTISEAAVGGAMLGQTTSEEAVGGATPDQTTSEKTVGGATLDQTTSEDAVGGATQGQ
TTSEEAVGGATLAQTTSEAAMEGATLDQTTSEKAPGGTELIQTPLASSTDHQTPPTSPVQ
GTTPQISPSTLIESLRTLELGSKSQGASESQAPGEENLLGEAAGGQDMADSMLMQGSRGL
TDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQENWVCLSCYQVYCGRYIN
GHMLQHHGNSGHPLVLSYIDLSTWCYYCQAYVHHQALLDVKNIAHQNKFGEDMPHPH
NT seq 3774 nt NT seq  +upstreamnt  +downstreamnt
atggaaaagaaaggccagggcgctcgcgtccccacgggtcgccagaaacttggcggagcg
agccaagggcggagtttgagaaaggggctgcgtccaaaccgcggcaggggtcaagcctcc
tcaactatgacctcaaccggccaggattctaccacaaccaggcagcgaagaagtaggcag
aacccccaatctccccctcaggactccagtgtcacttcgaagcgaaacattaaaaaggga
gccgttccccgctccatccccaatctagcggaggtaaagaagaaaggcaaaatgaagaag
ctgggccaagcaatggaagaagacctaatcgcgggactgcaagggatggatctgaacctt
gaggctgaagcactggctggcactggcttggtgttggatgagcagttaaatgaattccat
tgcctctgggatgacagcttcccggaaggccctgagcggctccatgccatcaaagagcaa
ctgatccaggagggcctcctagatcgctgtgtgtcctttcaggcccggtttgctgaaaag
gaagagctgatgttggttcacagcctagaatatattgatctgatggaaacaactcagtac
atgaatgagggagaactccgcgtcctagcagacacttacgactcagtttatctgcatccg
aactcatactcctgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtc
ctgggggctgaaatccggaatggcatggccatcattaggcctcctggacatcacgcccag
cacagtcttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgct
caacagaaacaccgcatccggagggtccttatcgtagattgggatgtgcaccacggtcaa
ggaacacagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctat
gagcagggtaggttctggccccacctgaaggcctctaactggtccaccacaggtttcggc
caaggccaaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgac
tacattgctgctttcttgcacgtcctgctgccagtcgccctcgagttccagcctcagctg
gtcctggtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgcc
actccggcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaacctccgcgccctggctgaaggtgtcagtgcttcg
ctccacacccttctgggagacccttgccccatgctggagtcacctggtgccccctgccgg
agtgcccaggcttcagtctcctgtgctctggaagcccttgagcccttctgggaggttctt
gtgagatcaactgagactgtggagggggacaacatggaggaggacaatgtagaggagaat
gaggaggaaggaccctgggagccccctttgctcccaatcctgacgtggccagtgctacag
tctcgcacagggctggtctatgaccaaagtatgatgaatcactgcaacttgtgggacagc
caccaccctgaggtaccacagcgcatcttgcggatcatgtgccgtctggaggagctgggc
cttgctgggcgctgcctcaccctgacaccgcgccccgccacagaggctgagctgctcacc
tgccacagtgctgagtacgtgggtcatcttcgggccacagagaaaatgaaaacccgggag
ctgcaccgtgagagttccaactttgactccatctacatctgccctagtaccttcgcctgt
gcacagcttgccactggcgctgcctgccgcctggtggaggctgtgctctcgggagaggtt
ctgaatggtgctgctgtggtgcgtcccccaggacaccacgcggagcaggatgcagcttgc
ggtttttgctttttcaactccgtggctgtggctgctcgccatgcccaggctatcagtggg
cgtgccctgcggatcctgattgtggattgggatgtccaccatggtaatggaactcagcac
atgtttgaggatgaccccagtgtgctatatgtgtccctgcaccgctatgatcatggcacc
ttcttccccatgggggatgagggtgccagcagccagatcggccgggctgctggcacaggc
ttcaccgtcaacgtggcatggaacgggccccgcatgggtgacgctgactacctagctgcc
tggcatcgcctggtgcttcccattgcctacgagtttaacccagaactggtgctggtctca
gctggctttgatgctgcacggggggacccgctggggggctgccaggtgtcacctgagggt
tatgcccacctcacccacctgctgatgggccttgccagtggccgcattatccttattcta
gagggtggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctc
cttggagacccgccacccctgctgaccctgccacggccccctctatcaggggccctggcc
tcaatcactgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaag
gtagaagacagagagggaccctccagttctaagttggtcaccaagaaggcaccccaacca
gccaaacctaggttagctgagcggatgaccacacgagaaaagaaggttctggaagcaggc
atgggaaagatcacctcggcatcatctggggaagagtccactccaggccagactaagtca
gagacagctgtggtggccctcactcaggaccagtcctcagaggcagccacagggggagcc
acactggcccagaccatctctgaggcagccgttgggggagccatgctgggccagaccacc
tcagaggaggctgtcgggggagccactccggaccagaccacctcagagaagactgtggga
ggagccactctggaccagaccacctcagaggatgctgttgggggagccacgcagggccag
actacctcagaggaggctgtaggaggagctacactggcccagaccacctcggaggcagcc
atggagggagccacactggaccagactacgtcagagaaggctccagggggcaccgagctg
atccaaactcctctagcctcaagcacagaccaccagacccccccaacctcacctgtgcag
ggaactacaccccagatatctcccagtacactgattgagagtctcaggaccttggagcta
ggcagcaaatctcagggggcctcagaatctcaggccccaggagaggagaacctactagga
gaggcagctggaggtcaggacatggctgattcgatgctgatgcagggatctaggggcctc
actgatcaggccatattttatgctgtgacaccactgccctggtgtccccatttggtggca
gtatgccccatacctgcagcaggcctagacgtgacccaaccttgtggggactgtggaaca
atccaagagaattgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaat
ggccacatgctccaacaccatggaaattctggacacccgctggtcctcagctacatcgac
ctgtcaacctggtgttactactgtcaggcctatgtccaccaccaggctctcctagatgtg
aagaacatcgcccaccagaacaagtttggggaggatatgccccacccacactaa

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