Camelina sativa (false flax): 104713835
Help
Entry
104713835 CDS
T05044
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 6
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csat
Camelina sativa (false flax)
Pathway
csat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104713835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104713835
Ion channels [BR:
csat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104713835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
104713835
NCBI-ProteinID:
XP_010429350
LinkDB
All DBs
Position
9:complement(33372518..33375931)
Genome browser
AA seq
748 aa
AA seq
DB search
MFDTCGSKRVKSQVISGQLEKFVRLDSMDSRYSQGSEAGLNKCTLNIQGPKRFAQGSKTS
SGSFKKGFRKGSEGLWSIGRSIGLGVSRAVFPEDLEVSEKKIFDPQDKFLLLCYKLFVAS
CILAVSVDPLFLYLPFINDKAKCVGIDRKLAIIATTIRTVIDSFYLFHMALRFRTAYVAP
SSRVFGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQIVVWRFLFNSMGANVLATKQAL
RYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAL
ERNNDCWSKACHFNNQTCARNFLFCGNQNMKGYAAWDKIKVSVLQQYCPVDVPEDEEPPF
DFGIYLRALSSGIVSSKNFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSITLAIAG
LLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLET
RGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSY
LVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGDELLTWALDPKSGANL
PSSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAA
WRRYTKRKKLEQLRKEEEEEEERAAASVIAGGSPYSIRATFLASKFAANALRSVHKNRTA
KSALLLSSTKELVKFQKPPEPDFSAEDH
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacttgtggttccaaaagagtcaaatctcaagtcatcagtggccaactcgag
aagtttgtcaggttagatagtatggactcgaggtactcacaaggttctgaagctggtcta
aataaatgcacattgaacatacaaggacctaaacgttttgctcaaggaagcaaaacatca
tctggatctttcaagaaaggatttagaaaaggatcagaaggactttggtctataggtaga
tcaatcggactcggtgtttcacgcgctgtgtttccagaagatcttgaagtatcagagaag
aagatatttgatccacaagacaagtttcttttgctctgctacaagttgtttgtagcttct
tgtatactcgcagtatccgtggatccgctcttcttgtatcttccttttatcaacgataaa
gccaaatgcgttggtatagacaggaaacttgcaattatagcaactacgataaggacagtt
atagattcgttttatctctttcatatggctttacggtttagaacagcttatgttgctcca
tcgtcgcgtgtttttggtcgtggagagcttgttatagaccctgcacagatagctaagcgg
tatctacaacagtatttcatcattgatttgctttctgtgcttcctgttccacagattgta
gtttggagatttctcttcaattcaatgggtgcaaatgtgttggcaaccaaacaagctctt
cgatatatcgtgttagttcagtatataccgcgttttcttcgaatgtatcctttaagttcg
gagttgaagagaacagctggtgtatttgctgagactgcatgggctggtgcagcttattac
ttactactctacatgctcgcaagtcatattgttggggctttgtggtatttgcttgcttta
gaacgcaataacgactgctggagtaaggcctgccactttaataaccagacatgtgccaga
aacttcttgttttgtggtaaccaaaatatgaaaggttatgctgcttgggacaagattaaa
gtttcggttcttcagcaatattgccctgttgatgtccctgaggatgaagaacctcctttt
gattttggaatctacttaagagccctttcctctggcattgtctcatctaagaactttgtc
tctaagtacttcttctgtttgtggtgggggcttcagaatcttagtacacttggtcaaggg
cttgaaacgagcacataccctggagaggttatattctcgataacacttgctattgctgga
cttctactctttgctcttctcattggaaacatgcagacttatctccaatcgctaactatc
cggttagaagaaatgcgagtcaaaagacgtgactcagaacaatggatgcatcatcgaatg
cttccaccagaactgcgagaacgtgtcagacgatatgatcagtacaagtggttggagacg
cgtggagttgatgaagagaatcttgttcagaacctcccaaaggatcttagaagagatatc
aaacgtcatctctgtctcgccttagtccgaagagttccattgtttgagaatatggatgag
aggctgctagatgcaatctgtgagaggcttaagccatgtttattcactgagaagtcttac
ttagttcgtgagggagatccagtcaacgagatgctcttcataatccgtggtaggctcgag
agtgtaaccactgatggtgggagaagcggattctttaaccgcagtttacttaaagaagga
gacttctgcggtgacgagcttttgacatgggcacttgatcccaaatctggtgctaacctc
ccatcctcaacaagaaccgtgaaggccttaaccgaagtagaagctttcgctttgatagcc
gatgagctgaaatttgtggcgagtcagttcaggagactccatagtagacaagtgcaacat
actttcagattctattcacagcaatggaggacttgggctgcttgcttcatccaagctgca
tggcgacggtacacaaagaggaagaagttggagcaacttagaaaagaagaggaagaagaa
gaagagagagcagcagcatcggttatagcaggtggaagtccgtatagcatcagagcaacg
ttcttggcttcaaagtttgcggctaatgcacttcgtagcgttcacaagaaccggactgcg
aaatctgctttgttgttgtcatctactaaagaattggtgaagtttcagaaacctccagaa
ccagacttctcagctgaagatcattga
DBGET
integrated database retrieval system
