Camelina sativa (false flax): 104758833
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Entry
104758833 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP214-like isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104758833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104758833
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104758833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
104758833
NCBI-ProteinID:
XP_010480089
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Position
17:complement(33712809..33721184)
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AA seq
1829 aa
AA seq
DB search
MSQVEIEEDVEGDRIPTNDFYFERIGEPISIKENDAQFDLEKPPSQPLAISEGRGVVFVA
HSSGFFVGRTKDFISASKNSKAKDEKVYIEDLSLVDVPVGDVRILSLSSDDSILAVSVAA
DIHFFSVDSLLKKDAKPSFSHSPDDESGGFVKDFRWTRKDKHSYLVLSSSGKLFHGVDNA
PPRHVMDGVDAVEWSSKGSYIAVAQDNSLRILSSKFKEKRCIALSFDAWFGDSDEDCLVK
VDSIRWVRSNCILLGCFQLIDGREENYFVQVIRSPDGKISDGSSNLTALSFSDLFPCSMD
DLLPVGVGPHLLFSYIDQCKLAITANRKSIDEHIVVLDWSPGDNKSAVSVVDIDRETFLP
RIGLQENGDDNTIMGLCIDTVSVEGTVNVRSADDELKELLPYFVLVCLTLEGKLIMFNVA
SVAGPPASSDVDLASSSDIEDAHTSSVEDDLSKKSSEEPKQHQKLSVSVQNEQKRLNSED
FSIEQRFSNDNIFSKEFESVKSSVSGDNHKKQEPYAETPVKVEDGQQNMIPKQFGTSFGQ
PPLPLGYDTNKFAGFGPVVRVPEKLQNDTSAQSKSMHLQANVKSKSTPALFGSPGLKNTF
FQSPQNTPSQPWSSGQGVSPPDFVSSPFPSVKDTQHKQSVQSGTGLVNTPMSIKEKPLQF
IETGRASALSNLSPPLGQNRDANEEVEKIEPIPSIHCSQLSQQVKSSFEKSASNQQHKTP
LSTGPLRLDNSMSKQPSNINEMAREMDTLLQSIEGPGGFKDSCAFLLKSHVEELEQGLEN
LAGKCQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPE
LEAKRQHIMKLNKDLTHQLIELERYFNRLELDRYHEDGGLPVARRGVPNRSAPSRRVQSL
HSLHNTMSSQLAAAEQLSECLSKQMTLLKIDSPVKKNVKQELFETIGIPYDASFSSPDAV
KAKNASATKNLLLSSIPASINAQSRQRQSSAMKSSDPETARRRRESLDRNWAAFEPPKTT
VKRMLLHEQQKTGMNQQTVLSERLRCANNLQERSLLRLKDHASPVVSSNKGIMESFQQDT
LEAQSTPFKTRPPMPQSNSPFTISPISASKPSFNWSGNNSSSTISYTEQSAPPQSKDTRT
VSQPGGSNFPLKLPMASTVFEQTEKKAGGFKFSEAKANAFVESAAGSVQRLSTTSSGSDF
ESSKGFGAQLSPMSTGAGASSFPSKSLFGFKTSGSIPSDKVTLPAETVSVSSSPLPSTPL
DSVSTLSTPSSPPVSSSTQDLGVSVPASIPTSSKPAPQTFSLTSTSTVSATGFSDPFGKS
LTSANVDLNQAATATLSSSSGPTTGFTLNLPALSPSSPEIVSSSTGQSSLFPPSSTASQV
SSNLVSASSFQTDSNRLLSSTSSSLTPLSTSTAPDAFQSPQVSTPSSAVSITGPVSESKP
EAQSSSILSTESTVDSVANATKTQIEPLPVKSENSTPETTETPGSSSGFLSGFSSGTQSS
LASMAPPSFSWPGSAQPQQLSSTPVPFPVSSPTYASPFGEKKDTVDTQEDEMDEEAPETS
QTTELSMGSFGGFGLGSTPNPAAPKANPFGGPFGNATTTTSNPFNMTVPSGELFKPASFN
FQNPQPSQPAGFGTFSVTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPG
ATFGSPTGFGGANPGSGLSNAPASGGFAAVGSSATGGFAGMASAGRGFAGASSTPTGGFA
ALASGSGGFAGAAPVGGGGGFGGLGSGSGGFGGFAPPSSGGFAGAAGGGGFGGFAGQGQG
QSGGGGFSAFGGNSGATGKPSELFTQMRK
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagttgagattgaagaagatgtggaaggagatcgtatcccgacgaacgatttc
tacttcgagagaatcggcgaacctatcagtataaaagagaatgatgctcaattcgatctc
gagaaacctccgtcacagcctctcgctatctccgaaggccgcggcgtcgttttcgttgca
cattcctccgggtttttcgttgggaggactaaggatttcatctctgcatcgaagaacagt
aaggcgaaagatgaaaaggtttatattgaggatttgagcctcgtcgatgttcctgttgga
gacgttcgtatattgtctctctcatcggatgattcaattcttgctgtctccgtcgctgct
gatattcatttcttctctgtggattcacttcttaagaaggatgcaaaaccttctttttct
cattcacctgatgatgagtcaggaggctttgttaaggattttcgatggacaaggaaagat
aagcattcgtatcttgttctttctagttctgggaagctctttcatggagttgacaatgca
ccccctagacatgttatggatggtgttgacgccgttgaatggagttcaaaagggagttat
atcgctgtagcccaagataacagcctgcggattttgtcgtcaaaattcaaggagaaacgg
tgcatagcactatcatttgacgcctggtttggtgattccgatgaagactgtttagtcaaa
gttgattctatcagatgggtacgcagcaactgtattcttcttggatgctttcagctgatt
gatggcagggaagaaaattactttgttcaggttatcaggagtccagatgggaagatttct
gatggttcgtccaatctaactgctttatcattctccgatttgtttccgtgttctatggat
gatcttcttccggttggtgttggacctcatttgctctttagctacatagaccaatgcaaa
ctggcgatcacagcaaacagaaagagcatagatgagcatattgttgtacttgattggtca
cctggtgataacaaaagtgcagtctctgttgttgatattgatcgagagacctttttgcca
agaattgggctccaagagaatggcgatgacaatacgattatgggactctgtatcgatacg
gtctctgtggagggaactgttaatgtccgttctgctgatgatgaacttaaagaactcctg
ccatattttgttcttgtgtgcctcactttggaaggaaaactgatcatgtttaatgttgct
agtgttgcaggacccccagcttcatctgacgttgatttggcctcttcttctgatatagaa
gatgcacatacctcttcggttgaagatgatctttctaaaaaatcttctgaagagcctaaa
caacatcaaaagttgagtgtttcagtacaaaatgaacagaaacgcctcaactcagaggac
ttctctatcgaacaaaggttctcaaacgataacatatttagtaaggaatttgagtctgta
aaaagttcagtgtctggggacaaccacaagaagcaagaaccgtatgctgaaacaccggta
aaggttgaagatggtcaacaaaacatgattcctaagcagttcggaacaagttttgggcaa
ccacctttgcccttaggatatgacaccaacaaatttgcaggattcggtcctgtcgtccgt
gttcccgaaaagcttcaaaatgacacatctgcgcagtctaagtctatgcatttacaggcc
aatgttaagtcaaagagtacaccagctttatttggatctcctggcctgaagaacacattt
tttcagtcaccacaaaatacgccatctcagccatggtcaagtgggcaaggcgtctcaccg
ccagattttgtatccagtccctttccctctgtgaaagatactcagcataagcaatctgta
cagtctggaactggtcttgtgaatactcctatgagcatcaaagagaaacctttacaattc
attgagactggtagagcatcagctctgagcaatttaagtcctccgctaggccaaaaccgg
gacgctaatgaagaagtagagaaaattgagccaataccttctatccattgctctcaattg
tcacagcaggtgaaatcttccttcgaaaaatccgctagcaatcagcagcacaaaactccg
ctcagtactggacctctgagactcgacaatagcatgtcaaagcaacccagtaatataaat
gagatggccagagaaatggatacgcttttacagtccattgaaggaccgggtggtttcaag
gattcttgtgcttttttactgaaaagccatgttgaagaactggagcaaggacttgaaaat
cttgctggcaagtgccaaacatggaagagtacaattcacgagcagcaagcagagatccaa
catcttcttgacaaaacaattcaagttttggcaaaaaagacatacatggaaggtatgtat
aagcaaactgctgataaccagtactggcaactttggaaccgccagaagttgaatcctgag
cttgaggccaagcggcagcatattatgaaactaaataaggatttgacccatcaactaatt
gaactagagagatattttaatcggcttgaactcgatcgctaccatgaggatggtggactt
cctgtggcacgaagaggcgtgccaaatagatctgctccttccagacgtgtgcaatccctt
cacagccttcataatacaatgagttcccaattggcagctgctgagcaactctctgagtgt
ctctcaaaacaaatgacacttttgaaaatcgattcacctgtcaaaaagaatgtgaagcag
gagttgtttgagacaattgggatcccttatgacgcttctttcagttcaccagatgcggta
aaagctaaaaatgcatctgcaacaaaaaacttattactctcttctattccggcaagtata
aatgcacagtcaagacaacgtcagtcatctgctatgaaaagttctgaccctgagactgcc
aggaggagaagagaatcactagacaggaattgggctgcttttgagcctccaaaaacaact
gtcaaaaggatgcttctgcatgagcaacagaagacgggtatgaaccaacagactgtcttg
agtgagagactacggtgtgcgaataatttacaagagcgatcactgcttcgcctgaaagat
catgcatcacctgtagtctcctcgaataagggtattatggagtcattccaacaagacaca
ttggaagctcaatcaaccccatttaaaacgaggccacctatgccacaatccaacagtccc
tttaccatctctccaatctctgcatcaaaaccaagtttcaattggtccggaaataattct
agcagtacaatttcttatactgagcaatctgccccaccgcagagtaaggatacaaggaca
gtttcacaaccaggaggatcaaattttcctctgaaactaccaatggcctcgactgtattt
gaacagacagaaaaaaaggctggaggattcaaattttctgaagctaaggccaatgcgttt
gttgaatcagctgctggaagtgtgcagcggctttctaccacatcatccgggtctgatttt
gaatcaagcaaaggttttggcgctcagctttcaccaatgtctactggtgctggtgcatct
agtttcccttcaaaatcgttgtttggtttcaaaaccagtggcagtatccctagcgataaa
gttactttacctgctgaaacagtatcagtttcttcttcacctttgcctagcacaccactt
gattccgtttccaccttatctacaccatcatcacctccagtgtcatcctctacacaagat
ttaggagtttcagttccagcatctattcccaccagctcaaaaccagcaccacagacgttt
tctctcacgtctacatctacagtttcagctactggtttcagtgatccatttggtaaatcg
ttgaccagtgccaatgtagatctcaatcaagcagctacagctacactttcttcatcatct
ggccccacaactggtttcactcttaacttaccagctttgtctccatcgtcccctgaaata
gtctcatcctcaacaggccaatcttcattatttcctccatcttctacagcatcgcaagtg
tcatctaatctggtctctgcaagtagcttccagacggatagtaatcgtttgctttcatca
acttcctcttctttgactccccttagtacctcaaccgctcctgatgcgtttcagtctcct
caagtttccacaccgtcttccgccgtatccattacagggccagtctcagaatctaaacca
gaggctcaaagttcgtcaattctaagtacggaaagtactgtagattctgtagcaaatgca
acaaaaacacagattgagccgctaccggtgaaaagtgagaattcaaccccagagactaca
gaaacccctggcagttcatctgggttcttgtctggattttcatcaggaacacagtctagt
cttgcaagcatggcgcctccttcattcagttggccaggtagtgctcagccacaacagcta
tcatctacacctgtccctttccctgtgtcatcaccaacttatgcaagtccgtttggtgag
aaaaaagatactgtagatacacaggaagatgaaatggacgaagaagctccagagactagc
cagacaactgaacttagtatgggaagttttggaggtttcgggcttgggtcaactccaaac
ccggctgcccccaaagcaaatccatttggtggtccctttggtaatgctacaacaacaaca
agtaatccattcaatatgacagtccctagtggcgagctattcaaacctgcatcgttcaat
tttcaaaatcctcaaccatcgcaaccggcaggttttggtacgttttctgtaacaccttct
cagacacctgctcagagcggatttggccaaccgtcacagattggtgggggacaacaagct
ctagggtcggttcttggctcctttgggcagtcgagacagattggtgctggtctcccagga
gctacgtttggttctcctactggatttggtggcgcaaacccaggaagtggtctgtcaaat
gcaccagcatccggtggttttgctgctgttggttctagtgccacaggtgggttcgcgggc
atggcttcagctggtagaggctttgctggtgcttcttctactcccactggtggcttcgcg
gccttagcctcaggtagtggaggctttgctggtgctgctccagtaggaggaggcggtgga
tttggtggacttggttcaggctccggaggttttggaggctttgctcctcctagtagtggg
ggtttcgcgggtgcagcaggaggtggtggttttggtggtttcgccggccaaggacaaggc
caaagcggtggtggtgggttctcagcctttggtggcaactcaggggcaacaggaaagcca
tcagaactcttcacacagatgagaaagtga
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