Camelina sativa (false flax): 104778424
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Entry
104778424 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP214-like
KO
K14317
nuclear pore complex protein Nup214
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104778424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104778424
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104778424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
104778424
NCBI-ProteinID:
XP_010501170
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Position
3:complement(27990671..28000087)
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AA seq
1827 aa
AA seq
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MSQVEIEEDMEGDRIPTNDFYFERIGEPISIKEDDAQFDLENPPSQPLALSERRGVVFVA
HSSGFFVGRTKDVISASKNSKGKDEKVYIEDLSLVDVPVGDVRILSLSADDSILAVSVAA
DIHFFSVDSLLKKDAKPSFSHSPDDESGGFVKDFRWTRKDKHSYLVLSSSGKLFHGVDNA
PSRHVMDGVDAVEWSSKGSYVAVAQDNSLQILSSKFKEKRCIALSFDAWFGDSDEDCLVK
VDSIRWVRNNCILLGCFQLIDGREENYFVQVIRSPDGKISDGSSNLTALSFSDLFPCSMD
DLLPVGVGPHLLFSYIDQCKLAITANRKSIDEHIAVLDWSPGDNKSAVSVVDIDRETFLP
RIGLQENGDDNMIMGLCIDTVAVEGTVNVRSADDELKELLPYFVLVCLTLEGKLIMFNVA
SVAGPPASSDVDLASSSDIEDAYTSSVEDDLSKQSSEEPEQHQKLSVSVQNEQKRLNSED
FSIGKRFPNDNIFSKEFESVKSSVSGDNHKKQEPYAETPVEDGQQNMISKQFGTSFGQPP
LPLGYDTNKFAGFGPVVRVPEKLQNDTSAQSKSMHLQANVKSKSTPALFGSPGLKNTFFQ
SPQNTPSQPWSSGQGISPPDFVSNPFPSVKDTQHKQSVQSGTGIVNPPMSIKEKPLQIIE
TGRASALSNLSPPLGQNRDANEEVEKIEPIPSIHCSQLSQQVKSSFEKSASNQQHKTPLS
NGPLRLDHSMSKQPSNINEMAREMDTLLQSIEGPGGFKDSCAFLLKSHVEELEQGLENLA
GKSQTWKSTIHEQQAEIQHLLDKTIQVLAKKTYMEGMYKQTADNQYWQLWNRQKLNPELE
AKRQHIMKLNKDLTHQLIELERYFNRLELDRYHEDGGLPVARRGVPNRSAPSRRVQSLHS
LHNTMSSQLAAAEQLSECLSKQMTLLKIDSPVKKNVKQELFETIGIPYDASFSSPDAVKA
KNASSSKNLLLSSIPASINAQSRQRQSSAMKSSDPETARRRRESLDRNWAAFEPPKTTVK
RMLLHEQQKTGMNQQTVLSEKLRSANNLQERSLLRLKDHASPVVSSNKGIMESFQQDTLE
AQSTPFKTRPPMPQSNSPFTISPISASKPSFNWSGNNSSSTTSYTEQSAPPQSKDTRTVS
QPGGSNFPMKLPMASTVFEQTEKKAGGFKFSEAKANAFVETAAGSVQRLSTTSSGSDFES
SKGFGAQLSPMSTGAGASSFPSKSLFGFKTSGSIPSDKVTFPAETVSVSSSPLPSTPPDY
VSTLSTPSSPPVSSSTQDLVPASIPTSSKPAPQTFSLTSTSTFSATGFSIPFGKSLTSAN
VDLNQAASATLSSSPGPTTGFTLNLPALSPSSPEIVSSSTGQSSLFPPSSTASQVSSNLV
SASSFQTDSNRLLSSTSSSLTPLSTSTAPDAFQSPQVSTPSSAVSITGPVSESKPEAQSS
SILSTESTVDSVANATKTQIEPLPVKSENSTPEETTETPGSSSGFLSGFSSGTQSSLASM
APPAFSWPGSSQPQQLSSTPAPFPVSSPTYASPFGEKKDTVDTQEDEMDEEAPETSQTTE
LSMGSFGGFGLGSTPNPAAPKANPFGGPFGNATTTTSNPFNMTVPSGELFKPASFNFQNP
QPSQPAGFGTFSVTPSQTPAQSGFGQPSQIGGGQQALGSVLGSFGQSRQIGAGLPGATFG
SPTGFGGANPGSGLSNAPASGGFAAVGSSATGGFAGMASAGRGFAGASSTPTGGFAALAS
GSGGFASAAPGGGGGGGGFGGLGSGSGGFGGFAPPSSGGFAGAAGGTGFGGFAGQGQGQS
GGGGFSAFGGNSGATGKPSELFTQMRK
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagttgagattgaagaagacatggaaggagatcgcatcccaacgaacgatttc
tacttcgagagaatcggcgaacctatcagtatcaaagaggatgatgctcaattcgatctc
gaaaaccctccgtcacagcctctcgctctctccgaacgccgcggcgtcgttttcgtcgcc
cattcctccgggtttttcgttgggaggactaaggatgtaatctctgcatcgaagaacagt
aaagggaaagatgaaaaggtttatatcgaggatttgagcctcgtcgatgttcctgttgga
gacgttcgtatattgtctctctcagcggatgattcgattcttgctgtctccgtcgctgct
gatattcatttcttctctgtggattcacttcttaagaaggatgcaaaaccttctttttct
cattcacctgatgatgagtcaggaggctttgttaaggattttcgatggacaaggaaagat
aagcattcgtatcttgttctttctagttctgggaagctctttcatggagttgacaatgca
ccctctagacatgtcatggatggtgttgacgccgttgaatggagttcaaaagggagttat
gtcgctgtagcccaagataacagcctgcagatattgtcgtcaaaattcaaggagaaacgg
tgcatagcactatcatttgacgcctggtttggtgattccgatgaagactgtttagtcaaa
gttgattctatcagatgggtacgcaacaactgtattcttcttggatgcttccagctgatt
gatggcagggaagaaaattacttcgttcaggttatcaggagtccagatgggaagatttct
gatggttcgtccaatctaactgctttatcattctccgatttgtttccgtgttctatggat
gatcttcttccggttggtgttggacctcatttgctctttagctacatagaccaatgcaaa
ctggcgatcacagcaaacagaaagagcatagatgagcatattgctgtacttgattggtca
cctggtgataacaaaagtgcagtctctgttgttgatattgatcgagagacctttttgcca
aggattggtctccaagagaatggcgatgacaatatgattatgggactctgtatcgatacg
gttgctgtggagggaactgttaatgtccgttcggctgatgatgaacttaaagaactcctg
ccatattttgttcttgtgtgcctcactttggaaggaaaactgatcatgtttaatgttgct
agtgttgcaggacccccagcttcatctgacgttgatttggcctcttcttctgatatagaa
gatgcatatacctcttcggttgaagatgatctttctaaacaatcttctgaagagcctgaa
caacatcaaaagttgagtgtttctgtacaaaatgaacagaaacgcctcaactcagaggac
ttctctatcggaaaaaggttcccaaacgataacatatttagtaaggaatttgagtctgta
aaaagttcagtgtctggggacaaccataagaagcaagaaccgtatgctgaaacaccggtt
gaagatggtcaacaaaacatgatttctaagcagttcggaacaagttttggacaaccacct
ttgcccttaggatatgacaccaacaaatttgcaggattcggtcctgtcgtccgcgttccc
gaaaagcttcaaaatgacacatctgcgcagtctaagtctatgcatttacaggccaatgtt
aagtcaaagagtacaccagctttatttggatctcctggcctgaagaacacattttttcag
tcaccacaaaatacaccatctcagccatggtcaagtgggcaaggcatctcaccgccagat
tttgtatccaatccctttccttctgtgaaagatactcagcataagcaatctgtacagtct
ggaactggtattgtgaatcctcctatgagcatcaaagagaaacctttacaaatcattgag
actggtagagcatcagctctgagcaatttaagtcctccgctaggccaaaaccgggacgct
aatgaagaagtagagaaaattgagccaataccttctatccattgctctcaattgtcacag
caggtgaaatcttccttcgaaaaatccgctagtaatcagcagcacaaaactccgctcagt
aatggacctctgagactcgaccatagcatgtcaaagcaacccagtaatataaatgagatg
gccagagaaatggatacgcttttacagtccattgaaggaccgggtggtttcaaggattct
tgtgctttcttactgaaaagtcatgttgaagaactggagcaaggacttgaaaatcttgct
ggcaagtcccaaacatggaagagcacaattcacgagcagcaagcagagatccaacatctt
cttgacaaaacaattcaagttttggcaaaaaagacatacatggaaggtatgtataagcaa
actgctgataaccagtactggcaactttggaaccgccagaagttgaatcctgagcttgag
gccaagcggcagcatattatgaaactaaataaggatttgacccatcaactaattgaacta
gagagatattttaatcggcttgaactcgatcgctaccatgaggatggtggacttcctgtg
gcacgaagaggcgtgccaaatagatctgctccttccagacgtgtgcaatcccttcacagc
cttcataatacaatgagttcccaattggcagctgctgagcaactctctgagtgtctctca
aaacaaatgacacttttgaaaatcgattcacctgtcaaaaagaatgtgaagcaggagttg
tttgagacaattgggatcccttatgacgcttctttcagttcaccagatgcggtaaaagct
aaaaatgcatcttcatcaaaaaacttattactctcttctattcctgcaagtataaatgca
cagtcaagacaacgtcagtcatctgctatgaaaagttctgaccctgagactgccaggagg
agaagagaatcattagacaggaattgggctgcttttgagcctccaaaaacaactgtcaaa
aggatgcttctgcatgagcaacagaagacgggtatgaaccaacagactgtcttgagtgaa
aaactacggtctgcgaataatttacaagagcgatcactgcttcgcctgaaagatcatgca
tcgcctgtagtctcctcgaataagggtattatggagtcatttcaacaagacacattggaa
gctcaatcaaccccatttaaaacgaggccacctatgccacaatccaacagtccctttacc
atctctccaatctctgcatcaaaaccaagtttcaattggtccggaaataattctagcagt
acaacttcttatactgagcaatctgccccacctcagagtaaggatacaaggacagtttca
caaccaggaggatcaaattttcctatgaaactaccaatggcgtcgactgtatttgaacag
acagaaaaaaaggctggaggattcaaattttctgaagctaaggccaatgcgtttgttgaa
acagctgctggaagtgtgcagcggctttctaccacatcatccggatctgattttgaatca
agcaaaggttttggcgctcagctttcaccaatgtctactggtgctggtgcatctagtttc
ccttcaaaatcgttgtttggtttcaaaaccagtggcagtatccctagcgataaagttact
tttcctgctgaaacggtatcagtttcttcttcacctttgcctagcacaccacctgattac
gtttccaccttatctacaccatcatcacctccagtgtcatcctctacacaagatttagtt
ccagcatctattcccaccagctcaaaaccagcaccacagacgttttctctcacgtctaca
tctacattttcagctactggtttcagtattccatttggtaaatcgttgaccagtgccaat
gtagatctcaatcaagcagcttcagcaacactttcttcatcacctggccccacaactggt
ttcactcttaacttaccagctttgtctccatcgtcccctgaaatagtctcatcctcaaca
ggccaatcttcattatttcctccatcttctacagcatcgcaagtgtcatctaatctggtc
tctgcaagcagcttccaaacggatagtaatcgtttgctttcatcaacttcctcatctttg
actccccttagtacctcaaccgctcctgatgcgtttcagtctcctcaagtttccacaccg
tcttccgccgtatccattacagggccagtctcagaatctaaaccagaggctcaaagttcg
tcaattctaagtacggaaagtactgtagattctgtagcaaatgcaacaaaaacacagatt
gagccgctaccggtgaaaagtgagaattcaaccccagaggagactacagaaacccctggc
agttcatctggattcttgtctggattttcatcaggaacacagtctagtcttgcaagcatg
gcgcctcctgcattcagttggccaggtagttctcagccacaacagctatcatctacacct
gcccctttccctgtgtcatcaccaacttatgcaagtccgtttggtgagaagaaagatact
gtagatacacaggaagatgaaatggacgaagaagctccagagactagccagacaactgaa
cttagtatgggaagttttggaggtttcgggcttgggtcaactccaaatccggctgccccc
aaagcaaatccatttggtggtccctttggtaatgctacaacaacaacaagtaatccattc
aatatgacagtccctagtggcgagctattcaaacctgcatcgttcaattttcaaaatcct
caaccatcgcaaccggcaggttttggtacgttttctgtaacaccttctcagacacctgct
cagagcggatttggccaaccgtcacagattggtgggggacaacaagctctagggtcggtt
cttggctcctttgggcagtcgagacagattggtgctggtctcccaggagctacgtttggt
tctcctactggatttggtggcgcaaacccaggaagtggtctgtcaaatgcaccagcatcc
ggtggttttgctgctgttggttctagtgccacaggtgggttcgcggggatggcttcagct
ggtagaggctttgctggtgcttcttctactcccactggtggcttcgcggccttagcctca
ggtagtggaggctttgctagtgctgctccaggaggaggaggaggaggcggtggatttggt
ggacttggttcaggctccggaggtttcggaggctttgctcctcctagtagtggaggtttc
gcgggtgcagcaggagggactggttttggtggtttcgccggccaaggccaaggccaaagc
ggtggtggtgggttctcagcctttggtggcaactcaggggcaacaggaaagccatcggaa
ctcttcacacagatgagaaagtga
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