Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Clst_0166
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Entry
Clst_0166 CDS
T02527
Symbol
pelA
Name
(GenBank) PelA
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
csd
Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
csd00040
Pentose and glucuronate interconversions
csd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Clst_0166 (pelA)
Enzymes [BR:
csd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
Clst_0166 (pelA)
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GFIT
Motif
Pfam:
Big_3
Beta_helix
CarboxypepD_reg
DUF4397
Phage_tube_C
Motif
Other DBs
NCBI-ProteinID:
AGI38277
UniProt:
L7VKK9
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Position
complement(185243..188965)
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AA seq
1240 aa
AA seq
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MRNCKGLSILLCFLLVFFAMPFPAVAEEAEAMPVSEASEWSFSAFGSNTSVEKNPDPMIN
SDGSVKIVANGGKIASNEQGISFYYREVPSDANFEIKAKAEVLNFKGDDKQVSFGLMLMD
QIGQHRNSEKHNSNYIAVGALDTIIKAFYMQESLTKTDMLSQTPSQGDIFELSIKKSGDN
YVLTCNGTTETFTLPGLFSDTIYVGIYAARNAEIKFSDLNFTLDTKDIVDLSVDLSGMKT
SYLVDEPLNLKGLKVTAHYSDGTSEELTEEDYIVTGFDSSTPGTNTICINVGEISKTIDL
EILPLTCTKLTVKYLPAKTDYYLGDSFNPEGLKVIAEYNDGYKVTELTEDKYALYIAGKA
AEDYVFSKAGTQKVEVISRENPSVKTGFEVNISDASIESLEIFRKPEKTAYFIGDEPDLT
GLVVYARYSDGSKVRLDKSEYEVNGFDSSAPGEKEITVYHKGKTVAFSVVVKEKEVMGIE
VTKYPKTTYYIGETFNAEGLEVSKVYDNGDREPLTDFSVDASAFDGSTPGVYDVIISADG
FDPITLKVTVREKTEYEWKAIRFGQSTSDSKNYVNFLDNGAVEIVALEGGGKIATDHDGI
TFYYTEIDAKDNFVLSADIKVKEYAKNPHDGQESFGIMARDAIGTPGDSSIFASNIAAIG
GFSGGTKSPNGTQLFIRTGVSSPDGAGSKGIRRIMIKDEKPGPDNTYPAAEYRLTLAKTN
SGFVGKLNDGEEVIFYEPDILNVQDSKIYVGFFAARLATIEVSNIELYVSSSETDAPRYI
PPEAPVTPSLQILSLDKTSNVNYSLVVKPNVNGSITVKQGAEILVRDVTVNAGEKYSVDA
VLEKNSENPFTVIFIPDDTQNLSSYEKIIKNFSVTMRTYNEGGNIYVSPNGTPYGDGTKD
NPLDLDTAIAFVKEGQKIILMNGVYKRDSALVISRYNDGTAENRKYLVAEPGSRPVIDFD
KKGQGVTLSGNYWYIEGIDFARSAPNYPGFIIGGNYNIVENCRFYENGDTGLQISRTDSS
ENIAEWPSYNKIINCESFDNRDPSENNADGFAAKLTCGVGNMFIGCVSHHNIDDGWDLYT
KAGTGAIGPVIIDSCIAYENGTLTDGTVGKGDKNGFKLGGEGVPVQHIIKNSIAFNNGAV
GFTSNSNPSVIAINNIAYNNAKGNLVFTSYSGIETHFVVDGFVSYNTEGAPRDSATGVPA
SDDNYLFDGTKSVNKSGEELTEKEFIEKLLELISKIKSIK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagaaactgcaaagggttgtcaattttgttatgcttcttgctcgtattttttgccatg
ccttttcctgccgtagctgaagaagcagaggcaatgcctgtgagcgaagcctctgaatgg
tcgttttcagcgtttggctctaacacatcggttgaaaaaaatcccgacccgatgattaat
tccgacggttcggtcaagattgtcgcgaacggaggaaaaatagcaagcaacgagcaggga
atatccttctattacagggaagtgccttccgatgccaatttcgaaataaaggcaaaagcc
gaagttctgaactttaaaggtgacgacaaacaggtatctttcggtttaatgctgatggac
caaataggccagcaccgtaattccgaaaaacataactccaattacatagccgttggcgct
cttgatacaataattaaagcattttacatgcaggagagccttacaaagacagacatgctg
tcccaaactccgtcccagggtgatattttcgaactttcaatcaaaaaatccggggataat
tatgttttgacatgtaacggcacaaccgaaacctttacgctgccgggactgttttcggac
acaatatacgtgggaatttatgccgcgagaaacgcagaaattaaattcagcgatttgaat
tttacactcgatacaaaagatattgtggatttatcagttgacctctccggaatgaaaact
tcctatcttgttgatgaacctttaaacttaaaaggtcttaaggttacggctcactattcc
gacggaaccagcgaagaactcaccgaagaggattacatagtaacaggttttgacagcagc
actccgggaacaaacacaatctgcataaatgtcggtgaaattagcaaaactattgatctg
gaaatactcccactgacctgcacaaaattaacggttaaatatttacccgccaaaaccgat
tactatttaggcgattcttttaacccggaaggtttgaaagttatagccgaatataatgat
ggctacaaggtgactgaattgacagaggacaaatacgcattatacattgccggtaaagcc
gctgaagattacgtgttcagcaaggcaggcacacaaaaagttgaagtaatatcccgggaa
aatccttcggttaaaaccggatttgaagtaaacatttcggacgcgtcgattgaaagtctt
gagattttccgcaaacccgaaaaaaccgcttatttcatcggtgatgaacctgatttgacc
ggtcttgttgtttacgcccgttacagcgacggctcaaaggtccgcctcgataaaagcgaa
tatgaagtaaatggctttgattcgtcagcgccgggcgaaaaggaaatcaccgtttaccat
aaaggtaagacggtggcattcagtgtggttgtaaaggaaaaggaagtaatggggattgaa
gttacaaaatatcccaaaaccacatactacatcggtgaaacttttaatgccgaaggactt
gaggtttcaaaggtttatgacaacggcgacagagaacctctcaccgatttttccgtcgat
gcctcggcatttgacggcagtacgccgggggtatatgacgtaatcatttcggccgacggt
tttgatccgataaccctcaaggtaacagtgagggaaaagaccgaatatgaatggaaggct
atccgtttcggccagtctacgtctgattcgaaaaactatgtaaatttcctcgacaacggc
gcagttgaaatagtcgccctcgaaggcggcggaaaaattgcaaccgaccacgacggtatt
accttctactataccgaaattgacgcaaaggataatttcgtcctctccgccgacattaag
gtcaaggaatacgccaagaacccgcatgacgggcaggagtccttcggtataatggcccgt
gacgcaataggcactccgggtgattcaagcatctttgcatcaaatattgccgcaataggc
ggtttcagcggcggcacaaagagcccgaacggcactcagctttttattcgtacgggagtt
tcctctcctgacggcgcaggcagcaaaggtatacgtcggattatgatcaaggatgaaaag
cccggtccggacaatacctatcccgccgcagaatacagactgacactggcaaagaccaac
agcggttttgtcgggaaactcaatgacggcgaggaagtaatcttttacgaacccgatatt
ctgaacgtacaggattccaaaatttatgtgggattctttgcagcccgcctggcaacgatt
gaagtaagcaacatagaattgtatgtatccagcagcgaaaccgacgcgccgcggtatatt
ccgcccgaagctcccgttactccgtcactgcaaatcctgtccctcgacaaaacgtcgaat
gtgaattacagtcttgtggtcaagccgaatgtaaacggcagcatcaccgtaaaacagggt
gctgaaatccttgtcagagatgtaacggtaaatgccggtgaaaaatattcggttgacgct
gtccttgaaaagaacagcgaaaacccgttcaccgtaatcttcatccccgacgatacacag
aatttgtcgagctatgaaaaaataatcaaaaatttcagcgtaacgatgagaacatacaac
gagggcggaaacatttacgtatccccgaacgggacaccttacggagacgggacaaaagac
aatccccttgaccttgacacggcaattgcctttgttaaggaaggacagaaaataatcctt
atgaacggtgtttataaacgggattccgcactggttatttccaggtacaacgacggaacg
gccgagaacagaaaatatctggtagccgaacccggttcaaggcctgtcatagactttgac
aaaaaaggccagggtgttaccctgagtggtaactactggtatattgaaggcattgacttt
gcaagatcggcacctaactaccccggctttataatcggcgggaattataatatagtggaa
aactgccggttctatgaaaacggcgataccgggcttcagatcagcagaacagattcatcg
gaaaatattgccgaatggccgtcatacaacaagattataaactgtgaatcctttgacaac
cgcgatccgtccgaaaacaatgctgacggctttgccgcaaaactcacatgcggtgtcgga
aatatgtttattggctgcgtttcgcatcataatattgacgacggatgggatctttacacc
aaagccggtacgggcgccatcggacctgttattatcgacagctgcatagcttatgaaaac
ggaactcttaccgacggcacggttggcaaaggcgacaagaacgggttcaagctcggcggc
gaaggcgttccggtacagcatataatcaaaaacagcatagcttttaacaacggtgcggtg
ggctttacaagcaacagcaacccgagcgttatagccattaacaatatcgcctataacaat
gccaaaggcaatctggtattcacatcctacagcggtattgaaacccattttgtggtcgac
gggtttgtttcatacaatactgaaggcgcacccagggattcggcaacaggtgttcccgct
tccgatgacaattacctgtttgacggaacaaagtcggtaaacaaatcgggtgaagaactc
acagaaaaagaatttatcgaaaaactgcttgaacttatttcaaaaataaaaagcataaaa
taa
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