Cynoglossus semilaevis (tongue sole): 103392001
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Entry
103392001 CDS
T04866
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3 isoform X1
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103392001 (wdr3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csem03009
]
103392001 (wdr3)
Ribosome biogenesis [BR:
csem03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103392001 (wdr3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
ANAPC4_WD40
NBCH_WD40
WDR54
RMC1_N
Utp21
Nup160
Motif
Other DBs
NCBI-GeneID:
103392001
NCBI-ProteinID:
XP_008326736
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Position
16:complement(9196144..9205670)
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AA seq
974 aa
AA seq
DB search
MGLTKQYLRYVSSAVFGVIGSQKANISYVKLRGGEKGRYVAVAACEHVFIWDVRKGEKVL
ILQGQKHEVTFLCPSPDGVHIAVGYEDGAVRIFNLMNGESNVSFNGHKSAVTVIRYDVLG
ARLVTGSKDTDVIVWDIINECGLYRLRGHKDVITQALFVKDKNLLVTSSKDNFVKWWDLD
TQHCFNTMVGHRSEVWGMVLLNQESRLLTGSADSELRAWDIQYIQEEKAEGEPQEKKGKT
LLDDDDDDDDKDADEGVEERILRCKKAGSILREARDRVVSLTMDTRARVIACHGNDSVLE
LFSVLTEEEVKKKMAKKLKKVKKKAAKAQEDGGEEAGEPVVEKMLKDEIVRLVNIKASSK
IRWVDCISCAGNELKLALLLQNNTVETYSLKMSDKTPTANKTARLTLGGHRTDVRTLAFS
SDNLAVLSASGDTVKVWNRSTLQVIRTMSCEYALCSLFVPGDRQIILGTKTGKLQIFELA
SGSLLETVDAHNGALWSLCLAPDQRGIVTGSADKTVKFWEFELVKDEGSGQKRLTVKHTR
TLQLEEDVLCVKFSPDHRLLAVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCLDISHVSS
MPPITGDDCLRFSSTNITAAVEVQTFAVVQQDSMIIATGSADRNVKIWGLDFGDCHRSMF
AHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDADKFELIQTLEGHHREVWCLSLSPSGDHI
VSSSHDKSMRLWERTREPIILEEEREMEREAEFEESFGKEDAPVVPGETQGEAAPAGKKT
VETVKAAERIMEALELLKEERKKLEEHKYACRHAGHELPLPKPNPILVAFGNISPSRYVL
DVIRKVRSSELEVSLLVLPFSYIPELLTLFSSYIHQGLEVELVCRCLFFLLKIHFGQISS
NQMLLSVIDELRMNTLSKVKEIRNMMGFNSAAMQFLQRQIESKEDVMFFADATGRLQEKK
KRRRKRERVVLTIA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaccaaacaatacctgcgctatgtttcaagcgcagtctttggagtaattggc
agccagaaagccaacatttcgtatgtgaagctcagaggaggagagaagggacgctatgtg
gctgtggcagcatgtgagcatgtcttcatctgggatgttcgaaaaggagagaaggttctg
atcctgcaggggcagaaacacgaggtgacattcctctgtccgtcacctgatggtgtccat
atcgctgttggttatgaggatggtgctgtgcgaatctttaacctgatgaatggtgaaagc
aacgtctcctttaatggacacaagtcagctgtcacagtgatacgttatgatgtattggga
gcaaggctcgtcactgggtccaaggacacagatgtgattgtgtgggacatcatcaacgag
tgtggtctgtaccgacttcgaggacacaaagacgtcatcacacaggccttgttcgtcaaa
gacaagaatctcctggtcaccagttctaaggacaactttgtgaagtggtgggatctggac
acacagcactgctttaacaccatggtgggccatcgcagtgaggtatggggtatggtgctg
ctcaaccaagagagcaggttgttaacaggctccgcagacagtgaactgagagcctgggac
attcagtacattcaggaggagaaagctgagggtgagcctcaagagaagaaggggaaaact
ctgctggatgatgatgatgatgatgatgacaaagacgcagatgaaggtgttgaagagagg
atcttaaggtgtaaaaaagcaggttccatcctacgggaggccagagacagagtggtgtcc
ctcacgatggacacaagagccagagtcatcgcctgccatggcaacgactcagtgctggag
ctcttctcggtgctgacagaggaggaagtgaagaagaaaatggccaagaagctgaagaaa
gtcaaaaagaaggcagccaaagctcaagaagatggaggagaggaagcaggggagccagtg
gtggagaagatgctgaaagacgagatcgtcagactggtaaatatcaaggcctcctccaag
atcagatgggtggactgcatttcctgcgcaggaaatgagttgaagctggctctgctgctg
cagaacaacacggtcgaaacctatagcttaaagatgtcggacaagacgcccacagccaat
aagacggctcggctcacacttggcggccaccgcactgacgtgcgtactttggcctttagc
tcagacaacctggccgttctgtctgcatctggggacacagtcaaagtctggaacagatca
actctgcaggtgattcgaaccatgtcctgtgaatacgccctctgctccctctttgtacca
ggagacagacagatcatcttaggaactaagactggtaaactgcagattttcgaactggcc
tcaggaagtctcctggagactgtggacgctcacaatggtgctctatggtctctgtgtttg
gccccggaccagagagggattgtgacaggaagtgcagacaaaacagtcaaattctgggag
ttcgagctggtcaaagatgaaggaagtggacaaaagaggctgacggtgaaacacactcgt
acactgcagctggaggaggacgttttgtgtgtaaagttttctcccgaccacagactgttg
gctgtctctctgttggactgtactgtcaaaatcttctacaccgacacgttgaagttcttc
ttgtccctgtatggacacaagctgcctgttctctgcctggacatctcacatgtgagtagt
atgccccctatcaccggtgatgactgtcttagattttcttcgactaatattactgctgcg
gtagaggttcaaacttttgctgtggtccaacaggacagcatgatcatcgctactggatct
gcagacaggaatgtgaagatctggggtctggactttggcgactgtcatagatccatgttt
gctcatgatgacagtgtcatgttcctccagtttgtccccaagactcacctcttcttcaca
gcaggaaaagacaagaagatcaagcagtgggacgctgataagtttgagctcatacagact
ctggagggccatcatcgtgaggtctggtgtctgagcctcagccccagcggcgaccacatc
gtgtcttcatctcacgacaagtcgatgcgtctgtgggagagaaccagagagcccatcatc
ctggaggaggagagggagatggagcgcgaggcagagtttgaagagagttttggaaaagaa
gatgcacctgtggttcctggagagactcaaggagaggcagcaccagctggtaaaaagaca
gtggaaacagtcaaagctgcagagagaataatggaggctctggagcttcttaaagaggag
cggaagaagctggaggagcataaatatgcctgtcggcacgcagggcatgagcttcctctg
cccaaaccaaaccctatccttgtggcctttgggaatatttcaccgtccagatatgtccta
gatgtgataaggaaggttagatccagcgagctggaggtttctctgttggtgctgccattt
tcttacatccctgagctgctgaccctcttcagcagttacatccatcagggtctggaggtg
gagctggtctgtcgctgcctcttcttcctgctcaaaatccactttggtcagatctccagt
aaccagatgctgctgtctgtcattgacgagctgaggatgaacacactgtccaaagttaaa
gaaatcagaaacatgatgggcttcaacagtgccgcaatgcagtttctgcagcgccagatc
gagagcaaggaagacgtcatgttcttcgccgacgccacgggacgactgcaggaaaagaag
aagcggaggaggaagagggagagggttgtcctcacaattgcataa
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