Cynoglossus semilaevis (tongue sole): 103392781
Help
Entry
103392781 CDS
T04866
Symbol
mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04120
Ubiquitin mediated proteolysis
csem04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103392781 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
103392781 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csem04121
]
103392781 (mgrn1)
Enzymes [BR:
csem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103392781 (mgrn1)
Ubiquitin system [BR:
csem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103392781 (mgrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
103392781
NCBI-ProteinID:
XP_008327721
LinkDB
All DBs
Position
17:complement(4328921..4346627)
Genome browser
AA seq
523 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENTDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDAQVEEGAKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAVYSPKDPSMVSETVHYKRGVSQQFSMPSFKIDF
SDWKEEDLNFDLDRGVFPMVIQAVVDEGDGRVILVDRVSYLLQEIYGIENKNNQETKPSD
DENSDNSNECVVCLSDLRDTLILPCRHLCLCNSCADTLRYQANNCPICRLPFRALLQIRA
VRKKPGALSPVSFSPVLAQTMDHDEHSSTDSVPPGFEPISLLEALNGQRSVSPAIPSAPL
YDEINFSGGIGGESRQLSSPEHLSDGSLQKSKVSKSPDSTLRSPSSPIQEEDEEKLSEMS
DAQPHTMLSSSPAPTDATATEDVAESLSPDDEDRMHSGGDILQDCDSEHSCLTKTESDPP
GDLSLPGSSESTESLKSQSTNSSSQPLLCPTSSLHLEDEHLTP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagtcgaagaatcgctggtgttgaggatatcgacattcaagctaac
tctgcttatagatttcctccgaaatccgggaactattttgcaagccacttcttcatggga
ggagagaagtttgacacaccacatccagagggatacctttttggagaaaacacggaccta
aatttcctgggaaatagaccagtgcagtttccttatgtgactcctgcaccccacgagcct
gtgaaaaccctgaggagcctggtcaatatcagaaaggactctttgcgtttggtcaggtat
aaagatgactctgacgcacaggtggaagaaggtgcaaaaccaaaggtccagtacggtgtg
gagtttacctttgacgctgacgctagagtggccatcacgctctactgccaggcgttcgaa
gagttctccaatgggatggcagtgtacagcccaaaagatccatcgatggtctctgaaact
gtgcattacaagcgaggagtgagccaacagttctccatgccgtctttcaaaatagacttc
agtgattggaaagaggaagatctgaactttgaccttgatcgaggtgtgtttcccatggtt
atccaggctgtggtcgatgaaggagatggcagagtgattttagtggaccgtgtgagttac
cttttacaggagatttatggcattgagaacaaaaacaaccaagagaccaagccgtcagac
gatgagaacagtgacaacagcaatgaatgcgtcgtctgcctctcagacctgcgggacaca
ctgatcctgccgtgcaggcatctgtgtctctgcaattcctgcgcagacaccttacgttat
caggccaacaactgtcctatctgcaggctaccttttagagcacttctgcagatcagagct
gtgagaaagaaacccggtgctctgtctcctgtgtccttcagccctgtccttgctcagacg
atggatcatgacgaacattcaagcacagactccgttcctcctggcttcgagcccatctcg
ctcctcgaggcgctgaacggtcagcggtccgtgtcccccgccatcccctccgccccgctg
tatgatgaaatcaacttctctggaggtataggtggtgagagcaggcagctgagctccccc
gagcatctgagcgacgggagcctgcagaagagcaaagtcagcaaatcccccgacagcacc
ctaaggtctccgtcatctcccatccaggaggaggacgaggagaagctgtccgagatgtcc
gatgctcagccgcataccatgctctccagcagcccagcccctacggacgccacagcaaca
gaggatgtggccgagtccctgtctccagacgatgaggacagaatgcattctgggggagac
attctgcaggactgtgacagcgagcacagctgcttgaccaaaacggagagcgacccacca
ggtgacctgtcactaccaggttcctcggagtcaacagaaagtctgaaaagtcagagcaca
aacagctccagccagcctctcctgtgtcccacgagcagccttcacctggaagacgagcat
ctcactccctga
DBGET
integrated database retrieval system