Cronobacter malonaticus CMCC45402: P262_00556
Help
Entry
P262_00556 CDS
T02955
Name
(GenBank) protein RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
csi
Cronobacter malonaticus CMCC45402
Brite
KEGG Orthology (KO) [BR:
csi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csi03016
]
P262_00556
Enzymes [BR:
csi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
P262_00556
Transfer RNA biogenesis [BR:
csi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
P262_00556
Prokaryotic type
tRNA splicing ligases
P262_00556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
AHB68763
UniProt:
V5TUG0
LinkDB
All DBs
Position
419100..420326
Genome browser
AA seq
408 aa
AA seq
DB search
MEENSYQTLAQANGAPVKMWTHGVPVEPEAREQLLKTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTKGAIIPAAVGVDIGCGMIAVRTSLVARDLPDNLSGLRSAIEQAVPHGRTTGRG
QRDKGAWSNTPQDVDHHWASLAPRFKRLTDKYPNLLKTNNHQHLGTLGTGNHFIEICLDE
QERVWVMLHSGSRGVGNAIGTHFIGLAQKDMQRHMANLPDRDLAYFEEGSKHYADYIEAV
EWAQDFARQNREVMMNRMLAALSAIITKPFMTQQEAVNCHHNYVQKETHFGEEILVTRKG
AVSAQKGQMGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRAMSRTAAKKRFTVEDQIRA
TAHVECRKDSDVIDEIPMAYKDIDAVMAAQSSLVEIVHTLRQVVCVKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaatagctatcagacgctggcgcaggctaacggcgcgccggtaaaaatgtgg
acccacggcgtgccggtagagccggaagcgcgtgagcaactgctgaaaacggcgaaaatg
ccttttatttttaaacacctggcggtaatgccggatgtgcatctgggtaaaggctcgacc
atcggcagcgtgatcccgaccaaaggcgcgattatcccggcggcggtgggggtggatatc
ggctgcggaatgatcgcggtgcgcacgtcgctcgtggcgcgcgatcttccggataacctg
agcgggttgcgcagcgccatcgaacaggccgtcccgcacgggcgcaccacagggcgcggt
cagcgtgataaaggtgcgtggtcgaacacgccgcaggatgtggatcaccactgggcatcg
cttgcgccgcgctttaaacgcctgacggataaataccccaacctgttgaagactaacaat
catcagcatctgggaacgctcggtacgggtaatcactttatcgagatctgccttgatgaa
caggagcgcgtgtgggtgatgctgcacagcggatcgcgcggcgtgggtaacgccatcggc
actcatttcatcgggcttgcgcagaaagatatgcagcgccatatggcgaatctaccggac
cgcgatctcgcctattttgaagaaggcagcaagcactacgccgattacattgaggcggtc
gaatgggcgcaggatttcgcgcgccagaaccgcgaagtgatgatgaaccgcatgctggcg
gcgctttccgcgattatcacgaagccgtttatgacgcagcaggaggccgtgaactgccac
cataactatgtgcagaaagagacgcactttggcgaagagatcctggtgacgcgcaaaggg
gcggtgtcggcgcaaaaaggccagatggggatcattccggggtctatgggcgccaaaagc
tttatcgtgcgtgggctgggaaacgaagagagcttctgttcatgcagtcacggcgcaggg
cgcgccatgagccgtaccgcggcgaaaaaacgcttcacggtggaagatcaaattcgcgcc
acggcgcacgttgagtgccgtaaagacagcgacgtgatcgatgagatcccgatggcgtat
aaagacatcgacgccgtgatggccgcgcagtcgtcgctggtggagattgtgcatacgctg
cgtcaggtcgtgtgcgtgaaaggatga
DBGET
integrated database retrieval system