KEGG   Cronobacter malonaticus CMCC45402: P262_00556
Entry
P262_00556        CDS       T02955                                 
Name
(GenBank) protein RtcB
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
csi  Cronobacter malonaticus CMCC45402
Brite
KEGG Orthology (KO) [BR:csi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:csi03016]
    P262_00556
Enzymes [BR:csi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     P262_00556
Transfer RNA biogenesis [BR:csi03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    P262_00556
 Prokaryotic type
   tRNA splicing ligases
    P262_00556
SSDB
Motif
Pfam: RtcB DUF4514
Other DBs
NCBI-ProteinID: AHB68763
UniProt: V5TUG0
LinkDB
Position
419100..420326
AA seq 408 aa
MEENSYQTLAQANGAPVKMWTHGVPVEPEAREQLLKTAKMPFIFKHLAVMPDVHLGKGST
IGSVIPTKGAIIPAAVGVDIGCGMIAVRTSLVARDLPDNLSGLRSAIEQAVPHGRTTGRG
QRDKGAWSNTPQDVDHHWASLAPRFKRLTDKYPNLLKTNNHQHLGTLGTGNHFIEICLDE
QERVWVMLHSGSRGVGNAIGTHFIGLAQKDMQRHMANLPDRDLAYFEEGSKHYADYIEAV
EWAQDFARQNREVMMNRMLAALSAIITKPFMTQQEAVNCHHNYVQKETHFGEEILVTRKG
AVSAQKGQMGIIPGSMGAKSFIVRGLGNEESFCSCSHGAGRAMSRTAAKKRFTVEDQIRA
TAHVECRKDSDVIDEIPMAYKDIDAVMAAQSSLVEIVHTLRQVVCVKG
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggaagagaatagctatcagacgctggcgcaggctaacggcgcgccggtaaaaatgtgg
acccacggcgtgccggtagagccggaagcgcgtgagcaactgctgaaaacggcgaaaatg
ccttttatttttaaacacctggcggtaatgccggatgtgcatctgggtaaaggctcgacc
atcggcagcgtgatcccgaccaaaggcgcgattatcccggcggcggtgggggtggatatc
ggctgcggaatgatcgcggtgcgcacgtcgctcgtggcgcgcgatcttccggataacctg
agcgggttgcgcagcgccatcgaacaggccgtcccgcacgggcgcaccacagggcgcggt
cagcgtgataaaggtgcgtggtcgaacacgccgcaggatgtggatcaccactgggcatcg
cttgcgccgcgctttaaacgcctgacggataaataccccaacctgttgaagactaacaat
catcagcatctgggaacgctcggtacgggtaatcactttatcgagatctgccttgatgaa
caggagcgcgtgtgggtgatgctgcacagcggatcgcgcggcgtgggtaacgccatcggc
actcatttcatcgggcttgcgcagaaagatatgcagcgccatatggcgaatctaccggac
cgcgatctcgcctattttgaagaaggcagcaagcactacgccgattacattgaggcggtc
gaatgggcgcaggatttcgcgcgccagaaccgcgaagtgatgatgaaccgcatgctggcg
gcgctttccgcgattatcacgaagccgtttatgacgcagcaggaggccgtgaactgccac
cataactatgtgcagaaagagacgcactttggcgaagagatcctggtgacgcgcaaaggg
gcggtgtcggcgcaaaaaggccagatggggatcattccggggtctatgggcgccaaaagc
tttatcgtgcgtgggctgggaaacgaagagagcttctgttcatgcagtcacggcgcaggg
cgcgccatgagccgtaccgcggcgaaaaaacgcttcacggtggaagatcaaattcgcgcc
acggcgcacgttgagtgccgtaaagacagcgacgtgatcgatgagatcccgatggcgtat
aaagacatcgacgccgtgatggccgcgcagtcgtcgctggtggagattgtgcatacgctg
cgtcaggtcgtgtgcgtgaaaggatga

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