Cronobacter sakazakii ATCC 29544: CSK29544_00540
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Entry
CSK29544_00540 CDS
T03903
Name
(GenBank) transcription termination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
csj
Cronobacter sakazakii ATCC 29544
Brite
KEGG Orthology (KO) [BR:
csj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csj03021
]
CSK29544_00540
03009 Ribosome biogenesis [BR:
csj03009
]
CSK29544_00540
Transcription machinery [BR:
csj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CSK29544_00540
Ribosome biogenesis [BR:
csj03009
]
Prokaryotic type
rRNA transcription factors
CSK29544_00540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KhpA-B_KH
S1_2
Motif
Other DBs
NCBI-ProteinID:
AKE93504
LinkDB
All DBs
Position
complement(553616..555103)
Genome browser
AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKAVPREKIFEALESALATATKKKYEQEIDVRVSIDRKSGDFDTFR
RWVIVEEVTQPTREITLEAARYEDPSLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVDQFREHEGEIITGVVKKVNRENITLDLGSNAEAVILREDMLPRENFRPGDRIR
GVLYAVRPEARGAQLFVTRAKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVEDLQAKHQAEAHAAIDTFT
KYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALTTLALA
QEESLGDNKPADDLLNLEGMDRTLAYKLAARGVCTLDDLADQGVDDLADIEGLTDEKAGE
LIMAARNIRWFSDEA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaattttggctgttgtcgaagcagtttccaacgaaaaagcggttccgcgc
gagaaaatttttgaagcgctggaaagcgccctggctacggcaaccaagaaaaaatatgaa
caagagatcgatgttcgcgtgagcatcgaccgtaaaagcggtgatttcgatacgttccgc
cgctgggtcattgtcgaagaagttacccagccgacccgagaaatcacgctggaagcggca
cgttacgaagatccgagcctgaatgttggcgactacgttgaagatcagattgaatccgta
acgtttgaccgtatcaccacgcagaccgcgaaacaggtcatcgtacagaaagtgcgtgaa
gctgagcgcgcgatggtcgttgaccagttccgcgagcatgaaggtgaaatcatcaccggc
gtggtgaaaaaagtgaaccgcgaaaacatcacgctggacctcggcagcaatgctgaagcg
gtcattctgcgtgaagacatgctgccgcgtgaaaacttccgtccgggcgaccgtatccgc
ggcgtactgtacgctgtccgtcctgaagcacgcggcgctcagctgtttgtcactcgcgcc
aagccggagatgctgatcgagctgttccgcatcgaagtaccggaaatcggcgaagaagtg
attgaaattaaagcggcagctcgcgatccgggctcacgcgctaaaatcgcggtgaaaacc
aacgacaagcgtatcgacccggtcggtgcctgcgtaggcatgcgtggcgcgcgtgttcag
gctgtgtcgaccgagcttggcggcgagcgtattgatatcgtgctgtgggatgataatcct
gcgcagttcgttatcaacgccatggcaccggcagatgtagcctctatcgtggtggatgaa
gacaaacacaccatggatatcgccgtcgaagcgggcaatctggcgcaggctatcggccgt
aacggccagaacgtgcgtcttgcttcacagctgagcggctgggaactcaacgtcatgacc
gttgaagaccttcaggccaagcatcaggctgaagcgcacgccgctatcgatactttcact
aagtatctcgatattgatgaagagttcgccacggttctggtggaagaaggcttctccacg
ctcgaagaactggcttatgtgccgatgaaagagctgctggaaattgacggcctggatgag
ccgaccgtggaagcattacgcgaacgtgctaagaacgcgctcaccacccttgcgctggct
caggaagagagcctcggcgataacaaaccggctgacgatctgctgaaccttgaaggcatg
gatcgcacgctggcttacaaactcgctgcgcgcggtgtgtgtacgcttgatgacctcgcc
gatcagggcgtggacgacctcgcggatatcgaagggttgaccgatgagaaagccggtgag
cttatcatggccgctcgtaacatccgctggtttagcgacgaagcgtaa
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