Coccomyxa subellipsoidea: COCSUDRAFT_14230
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Entry
COCSUDRAFT_14230 CDS
T02914
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCSUDRAFT_14230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csl03009
]
COCSUDRAFT_14230
Ribosome biogenesis [BR:
csl03009
]
Eukaryotic type
Pre-60S particles
GTPases
COCSUDRAFT_14230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_III
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
17042852
NCBI-ProteinID:
XP_005649395
JGI:
14230
UniProt:
I0Z2I2
LinkDB
All DBs
AA seq
1008 aa
AA seq
DB search
MLENSLRWLGAWQECIRNICILAHVDHGKTTMSDHLIASNGLIHPRLVGELRYLDSRDDE
QARGITMKSSAICLLHVPGHLINLIDSPGHVDFCSEVSTAARLSDGALVIVDAVEGVCIQ
THAVLRQAWQEKVRMCLVINKMDRLIHEVKLAPDEAYTRVRGIITHVNMILSAFQSEQHI
SDADAVLAHEDAKATADSSGLLEDDEESKEDEDMEFSPEKGNVAFASAHDGWAFRVGQFA
DLYAAKLGFKSSALARALWGEYRIDAKTKRIMRIKASQTAKYKPLFVQLVLEPLWKAYEA
VEPGADVKSILGKMCVQVSEKAISHPDAKTALRAVMRGWLPLSEAVLSMAVEQLPSPLEA
APERVPHLLALDAIEAAGAPRLPAAMQQAAMSACNTSADAPLVIYVSKMVAVPASALPRV
PGTDILQNNKLSTNCHCAGEPGPRDPKQEVFLAFARVFSGVVTDGQRVHVLSAAYNPARP
DLERQEVQKMTAPVQVDGLFLMMGQGLERLRSVPAGCVLALGGLDRSILKSATLSSSPAC
RPLAPMLFQASPIVRVAVESARPAEMPQLEEGLRLLNRADPFVELSVLDSGEYVIGAAAG
EVHLETIIKDLRERFARVDLSVSPPLVAFRESVYIEAEAPEPGHKPPKVTRPPVVEATTA
NGLCTLRVRALPIPSQVASALDNHADLLRRLFDAPSAPAPLAEASSASAEALLQRTWLLG
PKQVGPNILLMSSAETRVLEVPLGDGRAAAALGFAGDAAAAVAAEREAWQDLRWEGIPGN
VRHAVSSGVAAGFQMAGAAGPLCDEPLWGIAFEVAARLNLPEAGELAMAEDVYGPFSGQV
VFCAQVSSAARQALRRAVAEAHPLLVEAMLLCELSSTSDVLSGTYAVLGKRRARVVREEL
REGSNLFSILAFLPAQASFGLADDLRRRTSGGASAALMLSHWERLQVDPFFVPKTEVERE
EFGEEGQGVGTANLAHALIDTVRRRKGLAVDKKVVESATKQRTRARKV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaattcactcagatggcttggggcttggcaggagtgcatccggaacatatgc
attctggcgcatgtggatcatggcaaaacgacgatgtcagatcacctgatcgcttcaaac
ggcctcatacatcctcgactggttggagagctgcgataccttgacagcagggatgatgag
caggctcgcggcataacaatgaagtccagcgccatatgccttctgcatgtgcctgggcat
ctcatcaacctcatagactcgccaggccatgtggacttctgcagcgaggtcagcacagca
gcgcggctgagcgatggagctctggtgattgtggatgctgtggagggtgtctgcatccag
actcatgccgtgctgcggcaggcttggcaggagaaggtgaggatgtgcctggtgatcaac
aagatggacaggctgatccacgaggtgaagctggcgcctgatgaggcatacaccagggtg
cggggcataatcacacacgtgaacatgatcctgtcggccttccagagcgagcaacatatc
tcagatgcagacgctgtgctggcccacgaagatgccaaagccacggctgacagcagtggg
ctgctcgaagatgatgaagagtccaaggaggacgaggacatggagttctcccctgagaaa
gggaatgtggcatttgcgagcgcgcatgacggctgggcattcagggtcggccagtttgct
gacctgtacgcggccaagctgggcttcaagtcctctgccttggcccgcgccctttggggc
gagtacaggatagatgccaagaccaagcgcatcatgcgcatcaaggcttcccaaactgcc
aagtacaagccgctttttgtgcagcttgtgctggagccgttgtggaaagcgtatgaggca
gtggagcccggcgcagatgtgaagagcatccttggcaagatgtgcgtgcaggtgagcgag
aaggcgatctcgcacccggacgcaaagacggcgctgcgagcagtgatgcgcggctggctg
ccgctgtcagaggcggtgctgagcatggcggtggagcagctgccctccccactggaagct
gcccccgagcgcgtgccgcacctgctcgcacttgacgccattgaggccgccggtgcgccg
cggctgccagccgccatgcagcaggctgccatgtcagcatgcaacaccagcgccgatgcg
ccgctcgttatctacgtgtccaagatggtagctgtgcccgcctcggctctgccccgcgtc
cctggtacagacatattgcaaaataacaagttgtcaacaaattgtcattgcgcaggcgag
cccggtccgagggacccgaagcaggaggtgtttttggcgtttgcgcgcgtcttcagcggc
gttgtcacggacggccagcgcgtgcatgtgctctcagctgcctacaaccctgcacggcca
gatctggaaagacaggaagtccagaaaatgacggcgcctgtgcaggtggatggcctgttc
ctgatgatgggccaggggctggagcggctgcggtcggtgccggccggctgcgtgttggcg
ctggggggccttgaccgcagcatcctcaaatccgccaccctctccagctcgcccgcctgc
cggcccctcgcccccatgctcttccaggcgtcgccgatcgtgcgggtggcggtggagtcg
gcgcggccggcggagatgccccagctggaggagggcctgcggctgctcaaccgcgcagac
ccctttgtcgaactctccgtcctcgactccggcgaatacgtcatcggcgccgcagcaggc
gaggtgcacctggagacgatcataaaggatttgagagagcgattcgcacgcgtggatttg
agcgtgtcgccgccgctggtcgctttccgcgagagcgtctacatcgaggccgaggccccc
gagcccggccacaagccgccaaaggtgaccagaccacctgttgtcgaggcgacaacagcc
aacgggctgtgcacactacgcgtccgggcgctgccgatcccatcacaggtcgcctccgcc
ctggacaaccacgctgatctgctccggcgcctctttgacgcgcccagtgcacccgcacct
ttggccgaggcatccagcgcctctgcggaggccctactgcaacgaacctggctgctgggt
cccaagcaggtgggcccaaatatcttgctgatgtccagcgcggagacgcgagtgctggaa
gttccgttgggggacggccgcgcggcggcggcgctcggctttgccggcgacgcggcggcg
gccgtggcggccgagcgcgaggcgtggcaggatctgcggtgggagggcattcccggtaac
gtgcgccacgccgtttcgtcgggcgtggcggccggtttccagatggcgggcgctgccggg
ccgctctgcgacgagccgctctggggcatcgcctttgaggtggcggcgcggttgaacctg
ccagaagcaggcgagctggcaatggcagaggatgtgtacgggccattcagcgggcaggtg
gtgttttgcgcgcaggtgtcgagtgcggcgcggcaggcgctgcggcgcgcggtggcagag
gcgcacccgctgctcgtggaggccatgctcctctgcgagctgtcctccacgtccgacgtc
ctctcaggcacgtacgcggtgctgggcaagcggcgggcgcgggtggtgcgggaggagttg
cgcgagggcagcaacctgttttcaattctggccttcctccccgcgcaggcctccttcggc
ctggccgatgatctgcgccgccgcacctcggggggcgcctccgcagcgctcatgctctcc
cactgggagcgcctgcaggtggacccgttctttgtgccgaagacggaggtggagagggag
gagtttggcgaggaggggcagggcgtggggaccgccaacctggcgcacgcgctcatcgac
accgtgcgccgccgcaagggcctcgccgtcgacaagaaggtcgtcgagagcgccaccaag
cagcgcacccgcgcccgcaaggtctga
DBGET
integrated database retrieval system
