Coccomyxa subellipsoidea: COCSUDRAFT_46570
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Entry
COCSUDRAFT_46570 CDS
T02914
Name
(RefSeq) hypothetical protein
Organism
csl
Coccomyxa subellipsoidea
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cellulase
Motif
Other DBs
NCBI-GeneID:
17043048
NCBI-ProteinID:
XP_005649589
JGI:
46570
UniProt:
I0Z326
LinkDB
All DBs
AA seq
1409 aa
AA seq
DB search
MAARRLCLLLPAIVLGSLVQLCAAASLGDTSASNTASSTWASGDASPLIANPASVWFAAP
GPAPDAWAKPGAAPKQANTPETAAKSQAEASKLGLRRAPSNATAPTGAAVEAAATPGAWQ
KTAETPQETVAWAQEPSAAAPWASKPSAAAPWSAKTEGLSPTKAAAAAIGLVPGGSQNVA
SEVAPASPGECQSQFNEKENQRNGEGDRRRPGPNCIACVPSRICLALKFVICCHFQVSIL
LKKKSPHIITLASPCALKASQETATEKWAVPKNASSWEPAATKWAPGNATEWAPAPSKWA
PENATSWAPAASKWAPKAKPPAPARKQPGAYVKAPGGREAQPSDYVPESIRDIKWNNGGS
PGNASAKVYPTQADPQRQRPQLSGAEPTSAAYSGTGVVDSRSHSLDPTRVASDGRNNGAA
LQASNKPAATSGTHTLDATRMASNDFIPFGSQEGYEDVASRVNGQVVIPSDAEVRPEDVL
PTVSGDLGGDSSASAAAAPAPAPLANYTLPALLAPDVNASWHLVDSPPGATCEVLMRPYI
LQQDGHTNPNLWGAIEAERPPTSSPPADFLRGSVDLRIFNNATEDLQVPYTLTVVSAPSV
NYESASNMEILSSGPNGIGNLTATSPDLAIPAGSNMKANVTFTVNATNQDFFPRHVLLNG
QPCQLRIGLNLNVPIPTVLPNGTLIEDDEQPVSVTLGQFIGAKGEPLAIKGINWFGFETA
STMLDGLWQGPSAITQNFDSVAWRIKLMGFNTIRIPFSFQVLFNMVPRSYTAACTPTTAD
TVKQSVIPPGVTTPAGVNPPELMAPGDALGASGVCNADLPNTSGYARFLFVLRYFAANGF
YILIDNHLSFDNTAVSNTAQWLIWWKQLMTDVAALPSTRNRVMVDIMNEPDVLGLRWQGT
TPDMSSLYLAAMEAIYPISPTTLFFIEGGGQLPYAMCWGDGFVTDPAIIAANGLSDPNPF
FTTLLSKPYLNNVVISPHYYPPSISTAKTKVSGADLWERMQNSFGYLTSGQGYQGHVFPL
VIGETGSMYLTQADVLFLSDMAKYMKNDPAAAVYPHATLSHLMWWSWNPNSGDTGGIVQD
DWLTVIWNKVDFLINAVGLQPWYAAVLNGGAFDQPAADSLPGPAAPVPTVPPVPTEVPIA
TAPPAETVPPVQPAASDPPVDAIPPPDATTPPVTQQPEATTPPETQQPEATTPPETQQPD
TAAQLPSQRQQPQQQEPAQQEPATETNVPETTSATPPPETSVPPPSQTEPPQTTPSQTEP
PQTTTPLTTPPQTEPPQTTTPPQTTSASSSGSGSSCLVRASTGSVWSGGSGVYKASLDLH
LQATGGSSVAVPYTLRLSNPAYTALETSWTWEGSFAGGGAASGQVTQGWAELLKNSGNTV
DVGGIVVGSSQSLLPTEASINGVTCELRT
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgcaggctgtgcctgctactgccagccatcgtgctgggctctctagtgcaa
ctctgtgcagccgcctctttgggcgacacatcagcatccaacacagcttcctctacttgg
gcatctggcgatgcctcccctctcatcgccaaccccgccagcgtttggtttgccgccccc
ggccccgctcctgacgcttgggccaagccgggtgcggctcccaagcaggcaaacaccccc
gagaccgcagcaaagtcccaagcagaagcatcaaagcttggcctgcgcagagccccctca
aatgccaccgcgccaacaggtgcggccgtcgaggccgcagcgacccctggcgcgtggcag
aaaacagcagagacgccgcaggagaccgtggcatgggcccaggaaccctccgccgctgcc
ccttgggcctcgaaaccctccgccgccgccccctggagcgctaagaccgaggggctctcc
cccaccaaggccgctgccgccgccatcggcctcgtccccggtggatcccagaacgtcgct
tccgaagtcgctcctgcctctccaggtgaatgtcaatcccagttcaatgagaaggaaaac
cagcgcaacggcgaaggcgacaggaggcgccccgggcccaattgcattgcctgcgtcccc
tcccgcatctgcttggcgctcaaatttgtcatttgctgccattttcaagtcagcattctc
ctgaagaaaaagtcccctcacataatcacccttgcatccccatgtgctttgaaggcatct
caggagacggctacagaaaagtgggctgtccccaaaaatgcctcttcatgggagcctgcc
gccacaaagtgggctccaggcaacgccacagaatgggctcctgctccttctaaatgggca
ccagagaatgccacctcatgggcccctgcagcttccaagtgggcgccaaaggccaagccg
ccggcacctgcacggaagcagcccggcgcctacgtcaaagcccccggcggacgcgaagct
cagccgtccgactacgtcccagaatctatcagggacatcaagtggaacaatggaggctcg
ccagggaacgcctctgcgaaggtgtacccgacgcaggccgacccgcagcggcagcggccg
caactgtccggcgccgaaccaacctccgccgcctattcaggcactggggttgttgactcg
cgctcgcactccctggaccccacccgcgtcgcctccgacggccgcaacaacggcgcagcc
ctgcaagcctctaacaagccagcagcaacttctggcacccatactctggacgccactcgc
atggcgagcaatgacttcattccattcggctcccaggagggatatgaggacgtggcgtca
agggtgaacggccaagtagtcatccccagtgacgcagaggtgaggccagaggacgtcctc
ccaacggtgtccggcgatctcggcggtgactcatctgcttccgccgccgccgcgccggcc
ccggccccgctcgcgaattacaccctgcccgctttgctggcgccagatgtaaacgcctcg
tggcacctcgtcgactctcccccaggcgctacctgcgaggtgctgatgcggccctacatc
ctgcagcaggacgggcacaccaacccaaatctctggggcgccatcgaggcggagcggccg
ccaacttcttcccccccggccgatttcctgcgcggcagcgtcgaccttcgcatcttcaac
aacgccaccgaggacctacaggtgccatacacgctgacggtggtgtcggccccctcagtc
aactatgagagcgcgagcaacatggagatcttgagctcagggccgaatggcatcggcaac
cttacagccacttcgcctgacctcgcaatcccagctggctccaacatgaaggccaacgtc
acctttacggtcaatgccaccaaccaggactttttccctcgccatgtgctgctgaatggg
cagccatgccagctgcggatcgggctgaatctgaacgtgccgatccccacagtgctgccc
aatggcaccctcatcgaggatgatgagcaaccagtgtcggtcaccctcggccaattcatc
ggcgccaagggggagcccctcgccataaagggcatcaactggtttgggtttgagactgcc
tccacgatgctggacggcctctggcagggacccagcgccatcacacagaacttcgactct
gtcgcctggcgcatcaaactgatgggcttcaacaccatccgcatccccttctccttccag
gtgctgttcaacatggtgccacgctcctacacagccgcatgcacgcccaccacagcagac
actgtcaagcagagcgtcatcccacctggagtgaccacgcctgcaggagtcaacccccct
gaactgatggcacccggggatgcgctgggcgcgtcgggagtgtgcaatgctgacctgccc
aacaccagcggctacgcgcgcttcctcttcgtgctgcgctactttgcggccaacggcttc
tacattctcattgacaaccacctctccttcgacaacaccgccgtgtcaaacactgcacag
tggctgatatggtggaaacagctgatgacggatgttgcagcgctgccgtccacacgcaac
agagtcatggtcgacatcatgaacgagccggacgtgctgggcctgagatggcagggaact
acccctgacatgagctcgctgtacctggctgcaatggaggctatctacccgatttcccct
acgacccttttcttcatcgagggtggtggccagctgccatatgccatgtgctggggcgat
ggttttgtgacggaccccgccataattgcagccaatgggctgtcggacccgaaccctttc
ttcaccaccctgctctccaaaccctacctcaacaacgtcgtcatctccccccactactac
ccgccctccatctccacggcgaagaccaaggtctctggggcagatctttgggagaggatg
cagaactccttcggctacctgacttcagggcagggataccagggccatgtcttcccctta
gtgattggcgagacgggctccatgtacctcacgcaagcggacgtgctgtttctgagcgac
atggccaagtacatgaagaacgacccggcggctgcagtctacccgcacgccacgctgagt
cacctcatgtggtggtcctggaacccaaactccggggacaccggcggcattgtgcaggat
gactggctcacggtcatctggaacaaggtggactttctgatcaacgccgtcgggctgcag
ccctggtatgcagccgtgctgaatggcggcgcctttgaccagccggccgccgacagtctg
ccggggccggccgcgccggtgccgacggtcccccctgtgcccacagaggtgccaatcgca
acggcgccccccgccgagacggtccccccggtgcagccggccgcctccgacccgccagtg
gacgcaatacccccgccggatgccaccacccctccggtgactcagcagccggaggcaacc
acccctccagagactcagcagccggaggccaccacccctccggagactcagcagcccgac
accgccgcgcagctgccgtcacagcggcagcagccgcagcagcaagagcctgctcagcag
gagcccgccacagagacgaatgtgcctgagacgaccagcgcaacgccacctccagagacc
tccgtgccaccgccatcgcagacagagccgccacagacaacgccgtcgcagacggagccg
ccgcagacaacaacgccgctgacaacaccgccgcagacggagccaccgcagacgacaacg
ccaccgcagacgacctccgcgtccagttctggcagcggcagcagctgtcttgtgcgcgcg
tcgaccggaagtgtttggagcggcggcagcggcgtttacaaggccagcctcgacttgcac
ctgcaagcgactggcggcagcagcgtggccgtcccatacaccctcaggcttagcaacccg
gcgtacaccgccctggaaacatcttggacatgggagggctcctttgccggcggcggcgct
gccagcggccaggtcactcagggatgggcggagcttcttaagaacagcggcaacacagta
gacgttgggggaatagtggtgggctccagtcagagccttcttcccacagaagcttccatc
aacggagtgacctgcgagctcaggacatga
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