Coccomyxa subellipsoidea: COCSUDRAFT_47536
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Entry
COCSUDRAFT_47536 CDS
T02914
Name
(RefSeq) TPR-like protein
KO
K03350
anaphase-promoting complex subunit 3
Organism
csl
Coccomyxa subellipsoidea
Pathway
csl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
COCSUDRAFT_47536
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csl01009
]
COCSUDRAFT_47536
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csl04121
]
COCSUDRAFT_47536
03036 Chromosome and associated proteins [BR:
csl03036
]
COCSUDRAFT_47536
Protein phosphatases and associated proteins [BR:
csl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
COCSUDRAFT_47536
Ubiquitin system [BR:
csl04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
APC/C
Other subunits
COCSUDRAFT_47536
Chromosome and associated proteins [BR:
csl03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
COCSUDRAFT_47536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
ANAPC3
TPR_16
TPR_12
TPR_19
TPR_17
TPR_11
TPR_14
TPR_9
TPR_4
TPR_15
TPR_10
TPR_21
TPR-S
TPR_20
ANAPC8
Motif
Other DBs
NCBI-GeneID:
17041176
NCBI-ProteinID:
XP_005647732
JGI:
47536
UniProt:
I0YXR9
LinkDB
All DBs
AA seq
781 aa
AA seq
DB search
MGSNAAEPYSEMEGHFVACIQESLSLYLYENAQFLGERLVAAFPKQAHFLLLATCYFRSD
QVHRAYHLLVANCSDSQSRYLLAQCCLRLGKLNEAEQALNPDGDPQKGEVPHGAAGYYLL
GKICALSNRHDTAIHYYAAALTLDPLLWCAYEELCNLGADAKAAGLLNRGRESESAAASP
SGISSSHAEAATPFTMQRASADSMMASGGWPPRNNRCPAFDDPLSPIEPTMPPTRHPNTA
YGFPTQEHAQNGLMTPATGSSGSFVTPSQMGSAGTMPPPVHRGGPGAPGRGLPPSTGNDR
GGCGFPLGMGGSKLAAGLRFTPGTAGRPPAQSVARNAPGQGPPQMPARPRGQPRGGRGSE
RDKSPRQPEPSGRLFEGPATLARRSSRVAPAPTAEHLATPGMSPADTIMWGGGLDYAGAK
LWAGQKTVNGQAAVLSLLQRLGEGYRHLAMYRCAEAVEAFARLPAAQYSTSWVLCCIGRA
YYEMVDYPQAARVFEWARQVDPTRLQGMEVYSTVLWHLKREVDLAHLAQEATAWDRRSPH
AWTIMGNCFSLQKARRPGSRSLLLSHRPEHETALRFFQRALQLDPAFPYAYTLCGHEYFA
NEDFDRAKACYENAIRLDRRHYNAWYGIGQIEYRQEKFEMAAFNFKFALNLNGRSSVLRC
NLGMALAKMGKPAEALAHMDKAIAADPANPLARFERAGVLLAQERFVDALAELEALRDIA
PREASVWFQMGKIYKRLDRPDEALQHLCHALDLKPSSGDANLIKAAIEKLRQSDEADEEE
M
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgaatgccgctgagccttactccgaaatggagggccatttcgtggcttgcatc
caggagagcttgtctctgtacttgtatgaaaatgcccagttcttgggtgaacgcctggtg
gcagccttccccaagcaggcccatttcctgctgttggcgacctgctatttccgatcggat
caggtgcacagagcataccatctgctggttgcgaattgcagcgattcgcagagcagatat
ctgctggcacagtgctgcctgcggctcggcaaactgaatgaagcagagcaggcgctgaat
ccagatggcgatccgcagaagggcgaggtgccacatggagcagcagggtactacctgctg
gggaaaatctgtgcgctgtccaacaggcacgacacagccatccactactatgctgcagcg
ctcacgctggaccctcttctctggtgtgcctatgaggagctgtgcaatctcggtgccgat
gccaaggcggcaggcttgctgaacagaggcagggaatctgagtcagcagcggcgagcccc
tcaggcatcagcagctcccatgcggaggctgccacgcccttcacaatgcagcgggcctct
gcagattccatgatggcgtccggcggctggccgccgcgcaacaaccgctgcccggccttc
gacgacccgctctcgccaatcgagcccaccatgccgccgactcgccaccccaacacagcc
tatgggttccccacacaggagcatgcacagaacggcctgatgacgcctgccaccgggtcc
agcgggtcgtttgtgacgccgtcgcagatggggtcggccggcacgatgccaccgccagtc
caccgcggggggcccggggcccccggcaggggcctccccccctccaccggcaacgatcgc
ggcggctgcggcttccccttgggcatgggcgggtccaagcttgcggcggggctgcgcttc
acgcccggcacagccggtcggccgcccgcgcagagcgtcgcgcgcaacgcaccggggcag
gggccgccgcaaatgccggcgcggccgcggggccagccgcgggggggcagggggtcagag
cgggacaagtccccacgacagccggagccgtctggacggctgtttgaagggcccgccacc
ctcgctaggcggagcagcagagtggctccggcgcccaccgcggaacatctagccacgccc
ggcatgtcaccggcagacaccatcatgtggggtggcggcctcgactatgcgggtgcaaag
ttgtgggcgggccagaagaccgtgaatgggcaggcagcggtgctgtcgctgctgcagagg
ctgggagagggctaccgccacctcgccatgtaccgatgcgcggaggcggtggaagcattt
gcacggctgccagcggcgcaatactcgacctcgtgggtgctgtgctgcattgggcgcgcg
tactatgagatggtggactacccgcaggccgcccgcgtgttcgagtgggcccgccaggtc
gaccccacccgcctccagggcatggaggtgtacagcacggtgctgtggcacctgaagcgg
gaggtggatctggcgcacctggcgcaggaggccaccgcctgggaccgccgctcgccgcac
gcctggaccatcatgggcaactgcttctccctccaaaaggcacgccgccctggcagccga
tcattactactctcccatcgacctgagcacgaaacggcgctgcggttcttccagcgcgcg
ctgcagctggaccccgcgttcccctatgcgtacacactgtgcgggcacgagtactttgcc
aacgaggacttcgaccgcgccaaggcctgctacgaaaacgccatccgcctcgaccgccgc
cactacaacgcctggtacggcattgggcagatcgagtatcggcaggagaagttcgagatg
gccgccttcaacttcaagtttgctctgaacctgaacgggcgcagcagcgtgctgcggtgc
aacctgggcatggcgctggccaagatgggcaagccagccgaggcactggcacacatggac
aaggccatcgcggcagacccggccaacccgctcgcgcgcttcgaacgagccggcgtcctg
ctcgcccaggagcgctttgtggacgccctcgctgagctggaggccctgcgggacatagct
ccgcgggaggcgagcgtgtggttccagatggggaagatctacaagcgcctggaccggccg
gacgaggcgctgcagcacctatgccacgcgctcgacctcaagccgtcctccggagacgcc
aacctcatcaaggcagccatcgagaagctgcgccagtccgatgaagccgacgaagaggag
atgtga
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