Clostridium cf. saccharolyticum K10: CLS_19900
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Entry
CLS_19900 CDS
T02614
Name
(GenBank) SpoIID/LytB domain
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cso
Clostridium cf. saccharolyticum K10
Brite
KEGG Orthology (KO) [BR:
cso00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cso01011
]
CLS_19900
Enzymes [BR:
cso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CLS_19900
Peptidoglycan biosynthesis and degradation proteins [BR:
cso01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CLS_19900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
NCU-G1
Motif
Other DBs
NCBI-ProteinID:
CBK77495
LinkDB
All DBs
Position
1939714..1942005
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AA seq
763 aa
AA seq
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MSSKKMVYWTGAVAAAVLLLIILIVTLDHNGNYVSRALAGKALALGMTDRETCEAWEDEN
ESNFPSSLKGQWYVKYLDYLIGNGYMELPGDEDGEERQADMEDFAAGAITYGEVAYAAEQ
VESGLSRALGVSRKKYSDPIPKEEWWLFYETFLKQADPEGTVQTKTIALYGTPANVEGAE
SWTAYTSEGELQFEGLSLDAYIDHEIEVCIRGTDIIRMERDVSDEVVYKNAWLIPDGEKN
RMEVYIGGTVREFPLEDAVEEEAGGVLADVSLKDGKIRKLSLKKDTIEGKVLAVRDNAIE
IEGYGNVAITDDFKVYKTYGTVKEARKKDILVGYDIQKFVVEDKRICAALLVKSFDARNI
RVLLMDTGFQSIFHDTVTLKCSVPMKVVLGDYEFTVEAGEKFTVFDGDERLRRSDRRFII
EPEDPTKSIDVTTIERGQGTPSYQGTLEISQEKEGLLLLNDLDVEDYLTRVVPSEMPASY
EMEALKAQAVCARTYAYRQIKANAYSQYGAHVDDSTNYQVYNNTASSERTDTAVMETYGQ
MVFYGDNPAETYYFSTSCGHTTDGTIWGADQSAVPYLKGVSLTDGRTVMKELRDNESFEK
FIRDKDEKTYDSTFPMYRWETKITNRSLEEKITGIGEIQALAVTERGTGGIAKKLKVYGS
EGETVISGESQIRSTLGSTELVYKKNDGKTLTGWSNLPSAYIAIDETARDEESGLRTFTI
WGGGYGHGVGMSQNGAQQMAREGMDYEDILTFFYDGVEIRELS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagttctaaaaagatggtttactggacaggggcggtggctgcggctgtgctcctgctg
attattctgattgtgacactggatcacaatggaaactatgtttccagagctctggcggga
aaggcgctggctctggggatgacagacagggaaacctgtgaagcctgggaggatgaaaat
gaatcaaacttcccctcctccctgaaagggcagtggtatgtaaaatatctggactatctg
ataggaaacgggtatatggagcttcccggggatgaagacggggaggaaagacaggcagat
atggaggacttcgccgcaggcgcgattacctacggggaagtcgcctatgcggcagagcag
gtggagtcaggtctttccagggctctaggcgtgtccagaaagaaatacagcgatcccatt
cccaaggaggagtggtggctgttttatgaaacctttctgaagcaggcagacccggaaggg
acagttcagacaaaaacgattgccctctatggaactccggccaatgtggagggggctgag
agctggacggcctacacaagtgagggggagcttcagttcgaggggctttccctggatgcc
tacatagaccacgagattgaagtgtgcatccgggggacggatatcatacgcatggagcgg
gatgtttcggacgaggttgtctacaaaaatgcctggctgatccctgacggggagaaaaac
aggatggaggtttatataggagggacagtaagagaatttcctctggaggacgccgtagag
gaagaggcaggaggcgtgctggccgatgtgtccttaaaggacggaaagataaggaagctg
tctttaaaaaaggacaccatagagggaaaggtgcttgccgtccgggacaatgccatcgaa
atcgagggctatggaaatgtggcaattactgatgactttaaggtttacaagacctacggc
acagtaaaagaggccagaaaaaaggatattctggtaggatatgacattcagaaatttgtg
gtggaggataagcgtatctgcgccgcccttctggtgaaaagctttgacgcgagaaatatc
agggtacttctgatggacacaggctttcagtctattttccacgacacagttaccctgaag
tgttctgtccccatgaaggttgtgctgggagactatgagttcaccgtggaggcaggggag
aagtttacagtctttgacggagatgagaggctcagaagatccgacaggcggtttatcatc
gaaccggaggatcccacaaagtctatcgatgtgactaccatcgagagggggcagggaacg
ccgtcctaccagggaacgctggaaatcagccaggagaaggaagggcttctgcttttaaat
gatctggacgtggaggactacctgaccagagtggttccaagtgagatgccggcctcctat
gagatggaggccctgaaggctcaggccgtctgcgccagaacctacgcctaccggcagatc
aaggccaatgcctacagccagtatggcgctcatgtggatgacagcaccaactatcaggtt
tacaacaacacggcctccagcgagcgcacagacaccgctgtgatggagacctacggccag
atggtattctacggggataatcctgcggaaacctattatttttccacctcctgcggccat
acaaccgacggaactatctggggagcagatcagagcgcagttccctatctgaagggagtg
tccctgaccgatggcagaactgtgatgaaggaactgagagataatgagtcctttgagaaa
tttatccgcgacaaggacgaaaagacctatgactccaccttccccatgtaccgctgggag
acgaagattacaaaccgcagcctggaagaaaagattacgggaatcggagagatccaggct
ctggctgtgacagagcggggaaccggcggaattgcgaagaagctgaaggtatacggaagc
gagggagagactgtcataagcggggaaagccagattcggagcactctcggaagcacggag
cttgtatacaagaaaaatgacggaaaaaccctgacgggatggagcaatcttccaagcgcc
tatatcgccattgacgagaccgccagagacgaggagagcggactgcgcaccttcaccatc
tggggcggcggctacggccacggcgtcggaatgagccagaacggcgcccagcagatggcc
agagaggggatggattacgaggacattctgaccttcttctacgacggcgtggagataagg
gaactgtcctga
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