KEGG   Clostridium scatologenes: CSCA_4678
Entry
CSCA_4678         CDS       T03803                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
csq  Clostridium scatologenes
Pathway
csq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CSCA_4678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csq03019]
    CSCA_4678
   03009 Ribosome biogenesis [BR:csq03009]
    CSCA_4678
Enzymes [BR:csq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     CSCA_4678
Messenger RNA biogenesis [BR:csq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CSCA_4678
Ribosome biogenesis [BR:csq03009]
 Prokaryotic type
  rRNA helicases
   CSCA_4678
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 T6PP_C AAA_19 AAA_30
Other DBs
NCBI-ProteinID: AKA71803
UniProt: A0A0E3MBL0
LinkDB
Position
complement(5061999..5063582)
AA seq 527 aa
MENIKFSDLNLHKKVLQAIDAMGFEEPSQIQAEAIPVILSGSDMIGQAQTGTGKTLAFGA
PVLSQIESSDKISALILTPTRELAIQVNDELARIAKFKRTKLLPVYGGQPIDRQIKSLRR
GVDVVVGTPGRILDHIKRNTLDLSGVKFLVLDESDEMLNMGFIDDIEEIIKSLNKDRQTL
LFSATMPKEIAKLASKYMKNEVKHIKIVKNSLTVEKIKQYYYEVKHKDRFESLCRILDID
EPSSAIIFCKTKRGVDELVESMQGRGYNVEGMHGDMGQNQRLNTLRKFKEGTLDFLVATD
VAARGIDVDDVSHVINYDLPQDMESYVHRIGRTGRANKEGIAYSLVTPREYIMIKQLEKF
TKSKIKRKEIPTLDEIFEAKYNSMLKDVKNTLEQNDYKDFIPVATGLDDDYNLVDVAAAL
MKMLFDREFNFDYNEDLSVKSTKPVRLFLSVGRIDKVTPVKILNFLEETSDIDVNEVGDI
DIFDKFTFIDLPEDLLDAVLSRSSGKRLNGRRVNIEVAKSKNNHSRK
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggaaaatattaaatttagtgatttaaaccttcataaaaaggttttacaagctatagac
gctatgggttttgaagaaccttctcaaatccaagctgaagcaatacctgttattttatca
ggtagtgatatgataggtcaagcacaaactggtacaggtaagactttagcttttggtgct
cctgtattaagtcaaatagaatctagtgataaaatatctgccttaatacttactccaaca
agagaactagcaatacaagtaaatgacgagttagctcgtattgcaaaatttaaaagaaca
aaattacttcctgtatatggtggtcagccaattgatagacaaataaaatccttaagaaga
ggcgtagatgttgttgttggaactcctggtagaattttagaccacataaaaagaaacact
ttggatttaagtggtgttaaattcttagttttggatgaatctgacgaaatgcttaatatg
ggatttatagatgatatagaagagattataaagtccttaaacaaggatagacagacactt
cttttctctgcaactatgccaaaagaaatagcaaaacttgcttctaagtacatgaaaaat
gaagtaaagcatataaaaatagttaaaaattctttaactgttgaaaaaattaagcagtat
tattatgaagtaaaacataaagatcgttttgaatcattatgtaggatcttagatatagat
gaaccttctagtgctataatcttttgtaagactaaaagaggcgtagatgaacttgtagaa
tctatgcaaggaagaggatataatgttgaaggtatgcatggtgacatgggacaaaatcaa
agattaaatacacttaggaaatttaaagaaggtactttagattttttagttgctacagat
gttgctgctagaggtattgatgttgatgatgtatcgcatgtaataaactatgatctacct
caagatatggagtcttatgtgcatagaattggtagaactggaagagctaacaaagaaggt
attgcttattctcttgtaactcctagagaatatattatgataaagcagttagaaaaattt
acgaaaagtaaaataaagagaaaagaaatccctactctagatgaaatttttgaagctaaa
tataacagtatgttaaaggatgtaaaaaatactctagagcaaaatgattataaagatttt
atccctgtagcaacaggattagatgatgattataatttagttgatgtagctgctgctctt
atgaaaatgcttttcgatagagaatttaattttgattataatgaagatttatcagtaaaa
tcaactaagcctgtaagattatttttatctgtaggtagaattgataaagttactcctgtt
aaaatactcaatttcttagaagaaacttctgatatagatgtaaatgaagttggagacatc
gatatatttgataaattcacatttatagatctacctgaagatttattggatgcagtttta
tccagaagcagtggtaagagattaaatggtagaagagttaatatagaagttgctaaaagc
aaaaataatcattctcgtaaataa

DBGET integrated database retrieval system