Clostridium saccharoperbutylacetonicum: Cspa_c15590
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Entry
Cspa_c15590 CDS
T02467
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csr
Clostridium saccharoperbutylacetonicum
Pathway
csr03420
Nucleotide excision repair
csr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cspa_c15590
03430 Mismatch repair
Cspa_c15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csr03400
]
Cspa_c15590
Enzymes [BR:
csr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cspa_c15590
DNA repair and recombination proteins [BR:
csr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cspa_c15590
MMR (mismatch excision repair)
Other MMR factors
Cspa_c15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
ResIII
DEAD
AAA_30
AAA_22
AAA_16
AAA_14
AAA_11
AAA_25
CarD_TRCF_RID
AAA_7
Glutaredoxin2_C
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
AGF55329
UniProt:
M1MBM8
LinkDB
All DBs
Position
1704145..1706163
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AA seq
672 aa
AA seq
DB search
MGVNLDKYQMSAVKAEERNALIVAAPGSGKTTVIINKVDHLVENKKVPNGNIIVITFTKA
AAQNMKNRYEAAFNKNRSPFFGTFHGLFYKILLRSGKNIEIIDGSIVHKIVSNVLMKYFD
EINEDKVKEAVNNISLFKTSRVPLSEFKSSLAKEIFIEALEKYEDYKKENNKRDFDDLAI
EVLEMLQRDENMLESYRKLFRYVLVDEFQDCDEMQVDFLKLINDGKENSLFAVGDEDQCI
YSFRGSKPEYMVSFDKIFKNGKKYYLSVNYRSKMNIVDKSKEIIRFNKERNNKEIHWNRE
AEGIIKWFNPYNEKMQGESLADIIEKNRSLGTPYEDNAILYRTNIESMTIIEVLAKRKIP
FTLLDREYNFFENFICKDLIAYLKLSINQFDLESFIQIINKPFRYISKGNIAYIKNYAKE
ENPFDILISKEDIPPFQKKKFDDLRKEINYLNKISLSAAISCIITDLGYMEHLKGYAKKL
NQSIEDLEDIIEEFKVAAEGSKTIFEFLSHIEEVKQSIEESKKKTKREGVILSTIHGVKG
MEFKNVYVINCVEETIPHANSIKDNIEEERRLFYVGVTRAIDNLYLFSPRNRKGQFKEVS
RFIIEGKLNDLPVDTFGYEVGNKVAHRTYGVAEIAELDEKDNDKIKLKFGDGTFRSFSLK
VLVDNNLIERAE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgggggttaaccttgataagtaccagatgagtgcagtaaaggcagaggaaagaaatgca
ttgatagtagcagcaccaggctctggaaaaacaacagttattataaataaagttgaccat
ttggttgaaaataaaaaagttcctaatggaaatataatagtaattacttttacaaaagcg
gcagcacaaaatatgaaaaataggtatgaagctgcttttaataaaaatagatctcctttc
tttggaacgtttcatggccttttttataaaattcttttaagaagtggaaaaaatattgaa
ataatagatggatcaattgttcacaaaatagttagcaacgttttaatgaaatattttgat
gaaattaatgaagataaagtaaaggaagctgtaaataatatttctttatttaaaacttca
agagtgcctttgagtgaatttaaatcttctcttgcaaaagaaatttttattgaagcttta
gaaaaatatgaagactataagaaagaaaataacaaacgagactttgatgatttagcaatt
gaagttttggagatgcttcaaagagatgaaaatatgcttgaaagttatagaaaattattt
aggtatgtattagttgatgaatttcaagattgtgatgaaatgcaggttgatttcttaaag
ctaataaatgatggaaaagaaaattcactttttgcagttggagatgaggatcaatgcatt
tattcatttagaggctcaaagccagaatatatggttagcttcgataaaatatttaaaaat
ggtaagaaatattacttatcagttaattatagaagtaaaatgaatatagttgataaatca
aaagaaataataagatttaataaggaaagaaataataaagaaatacattggaatagagaa
gctgaaggcattattaaatggtttaatccatataatgaaaaaatgcaaggagaaagtctg
gctgatattattgaaaagaatagaagtttgggtactccttatgaagataatgcaatatta
tatagaactaatatagaatctatgacgattatagaggtattagcaaaaagaaaaattcca
tttactttgctagatagggaatacaatttctttgaaaattttatatgcaaagatttaatt
gcatatttaaaattatccattaatcaatttgatttagaaagttttatacaaataataaat
aagccttttagatatataagtaaaggaaatattgcatatataaaaaattatgctaaggaa
gaaaatccttttgatatattgattagtaaagaagatattcctccatttcaaaagaaaaag
tttgatgatttaagaaaagaaataaattatttaaataaaatatcattatcagcagcaatt
tcctgtataattacagacctaggatatatggagcatttaaaaggatatgctaaaaagctt
aatcaaagtatagaggatttggaagatataatagaggaatttaaggtggctgcagaaggc
agcaaaactatatttgaatttttgtcacatattgaagaagtcaagcagtcaatagaagaa
agcaagaagaaaactaaaagagaaggggttatattgagtacaatccacggggtcaaggga
atggagtttaaaaacgtctatgttattaactgtgttgaagaaacaatacctcatgctaat
agtataaaagataatattgaagaggaaagaagacttttctacgttggagtaacaagagct
atagataatctttatttattttcaccaagaaatagaaaaggacagtttaaagaggtttca
cgatttataattgaaggaaagttaaatgatttgccagttgatacctttggatatgaagtt
ggaaacaaggttgcgcatagaacctatggagtggctgaaatagcagaacttgatgaaaag
gacaacgataagattaaactgaagtttggtgatgggacatttaggagtttttctttgaag
gtgttggtggataataatttgattgagagggctgagtga
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