Acetoanaerobium sticklandii: CLOST_1256
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Entry
CLOST_1256 CDS
T01334
Name
(GenBank) conserved protein of unknown function
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cst
Acetoanaerobium sticklandii
Pathway
cst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLOST_1256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cst03019
]
CLOST_1256
03400 DNA repair and recombination proteins [BR:
cst03400
]
CLOST_1256
Enzymes [BR:
cst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLOST_1256
Messenger RNA biogenesis [BR:
cst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CLOST_1256
DNA repair and recombination proteins [BR:
cst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLOST_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF559
ResIII
MTES_1575
DUF2726
Motif
Other DBs
NCBI-ProteinID:
CBH21376
UniProt:
E3PY61
LinkDB
All DBs
Position
complement(1413165..1416167)
Genome browser
AA seq
1000 aa
AA seq
DB search
MNQQVDFYLEQAKLVIEIDGQSHKTDNKTRINDKQRDLYLAKNGIKTIRIDAKDIKRKTE
ILLKKIHEIKNHLSSHEEKLYKYKFFLELQKDINTFRNYESILKYTAIIRFQILILSLLE
KDMLKLNDKNWILNIIERDIKDFEELALNDLFIWLEHLCKLNKLEFNRPIIKIYKSTNEK
LVLNKKAINIDFSLFKRWTDENDIDEIERNKIYVRSDYFDENNYFKVSTDKPIKYPLEIG
GSSGDLKSLKFILKNIFGFDNFNDGQLPVVVNSLKGEDTLGLLPTGGGKSLIYQFVGLLQ
PCISFIVVPIKSLMKDQRDGLDKKSIHNTNFINSSQNASEKNKIQNELGSEKYQFVWISP
ERFQTEEFRLKLQKISNFSNFGLAVIDEVHCLSEWGHDFRTSYLNLAKTIKEYCKGTRIL
GLTATASVNVLKDIMVEFDIPKENVKTKLSFTREELNFHIINDDGKNKRGKYNELIKLFK
KLIHEKNDNKGSGLIFTQFVNNGLLGCFELSESLKKEFKIDVQWYSGSIPKGLKYEMRMD
KFQEHQEQVQERFINDEFDWLVATKSFGMGIDKPNIRNTIHFGIPSSLESLYQEAGRAGR
DKQKADCYILLSEEFKGKDYFDDIFTGIPKIEDISSKLEEHKYNSRDVFNSLFLFTSSAK
DIKDEFNIIRHIFHSFAKPNYEVSISGVEDILKNKKGSEDKFLLKKSDLEKAIYKLSIIG
IVKDWIIESWDEHHPQIKVTFEDYSQESIETSLIKYVNKYDKEFNFKNSNKVSSNKYFQI
YKRENYSHINKMIHILLEWQYENILYHRLQSIYTVYTQCSKNQSKEEFKAYMEQYFKFDE
GVFKFDYISEDPENKDLWFSLIFNEKNEILKKEELEKLDISLRRFLESFKNNTGLNFLSG
IIKLLNDDYLNVDGKTRLESSFEEIQNFPEKEKDEIYEKCILISKHLDNKNKNYISELLH
LKLNKNPIKTYKAINDEYSLSEVLKESTKRIRAIEGERLW
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccaacaagtggatttttatcttgaacaagctaaactagtaatagaaattgatgga
caatctcataagactgataacaaaactcgtataaatgacaaacaaagagacttgtacctt
gctaaaaacggcataaaaactattagaatagatgctaaagacattaaaagaaaaactgaa
attttgttaaaaaaaatacatgaaataaaaaatcatttatcttcacatgaagagaaatta
tataagtacaagttttttttagaactgcaaaaagatataaatacctttcgaaattatgaa
tctatattaaaatatacagccattattagatttcaaattttaatactttctcttttagaa
aaagacatgcttaaattaaatgataaaaattggatattaaatataatagaaagagatatt
aaagattttgaagaattagcattaaatgacttatttatctggttagaacatttgtgcaaa
ttaaataagctggaatttaataggcctattataaaaatatataaaagtactaatgaaaaa
ttagttttaaataaaaaagctataaatattgatttttccctttttaaaagatggacagat
gaaaatgatatagatgaaattgaacgcaataaaatatatgttagaagcgattattttgac
gaaaataattatttcaaagtaagtacagataaaccaattaaatatcctcttgaaattggt
ggaagttctggcgatttaaagtcattaaaatttattttaaaaaatatatttggatttgat
aatttcaatgacggacaacttcctgtagtagtaaattcattgaaaggtgaggacacatta
ggtcttcttcctacaggtggaggcaaatcgttaatttatcagtttgtaggactgctacag
ccttgtatcagttttatagtggttcctattaaatctctaatgaaagaccaaagagatgga
cttgataagaaatctattcataatacaaattttattaatagtagccaaaatgcatctgag
aagaataagatacaaaatgaattaggttcagagaaatatcaattcgtttggatttctcca
gagcgatttcaaactgaagaatttcgcttaaagctacaaaaaataagtaatttttctaat
tttggtcttgcagttatagatgaagttcactgtcttagcgagtgggggcatgattttaga
acatcttatttaaatttagccaaaactattaaagagtattgcaaaggaacgagaatttta
ggattaactgcaactgcatccgtaaatgtgctgaaagatataatggtagaatttgatatc
ccaaaagaaaatgttaaaactaaattgtcttttacgagagaagaacttaattttcatata
ataaatgatgatgggaagaataaaagaggaaaatataatgaattaattaaactatttaaa
aaactaatacatgagaaaaatgacaataaaggctcaggattgatatttacacaatttgta
aacaacggcttactaggttgcttcgagctttcagaatctttaaaaaaagaatttaaaata
gatgtgcaatggtactctggttcaattcctaaaggtttgaaatatgaaatgagaatggat
aaatttcaagaacatcaagaacaagtacaagaaaggtttataaatgatgagtttgattgg
cttgtagcgactaaatcctttggaatggggattgataaacctaacattcgaaatactatt
cattttggaattccaagttcccttgaatcgctatatcaagaagctggcagagctggaaga
gataaacaaaaagctgattgctatatattgttatcagaagaatttaaggggaaagattac
tttgatgatatttttacaggaattcctaaaattgaagacataagttctaaattagaggaa
cataagtataattctagagatgtattcaatagcttgttcttatttacttcaagtgcaaaa
gatataaaagatgaatttaatataattagacatattttccacagttttgcaaaaccaaac
tatgaagtatcaatttctggagtagaagatatattaaaaaataaaaagggatcagaagat
aaattcctactaaaaaaatcagatttagaaaaagctatatataaattaagtattataggg
attgtaaaagattggataatagagagttgggatgaacatcacccacaaattaaagtaact
tttgaagattatagtcaagaaagtatagaaactagcctgattaagtatgtcaataaatat
gacaaagaattcaattttaaaaatagtaacaaagtttcttcaaataaatattttcaaatc
tataaaagggaaaattactctcatataaacaaaatgattcatatacttcttgagtggcaa
tatgagaatatactttatcatagactacaatcaatatatacagtttatactcagtgctct
aaaaatcagtctaaggaagaatttaaagcttatatggaacaatatttcaagtttgacgaa
ggtgtttttaaatttgattatatttctgaagatcctgaaaataaagatttatggttttca
ttaatctttaatgaaaagaatgaaatattgaaaaaagaagagcttgaaaaattagatata
tcactaagaaggtttttggaaagtttcaaaaacaacacaggattaaattttttgtcagga
attataaaactattaaatgatgattatttaaatgtagacggaaaaactcggttggaatct
tcttttgaagaaattcaaaattttcctgaaaaagaaaaagatgaaatatatgaaaaatgt
atattgattagcaaacatttagacaataaaaataaaaactatatttcagaattactgcat
ttaaagctgaataaaaatcccattaaaacatataaagctattaatgatgaatatagctta
agtgaagtattaaaagaatctacaaaaagaatacgagcaattgagggggaaagattatgg
tag
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