Cronobacter sakazakii Sp291: CSSP291_12075
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Entry
CSSP291_12075 CDS
T02461
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSSP291_12075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csz03019
]
CSSP291_12075
Messenger RNA biogenesis [BR:
csz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSSP291_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Rubella_Capsid
UvrD-helicase
P-loop_SecA
DUF6426
Motif
Other DBs
NCBI-ProteinID:
AGE86998
LinkDB
All DBs
Position
complement(2527874..2529208)
Genome browser
AA seq
444 aa
AA seq
DB search
MSFDSLGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLL
QRLTANQPHPKGRRPVRALILTPTRELAAQVGENVREYSKYLDIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDQVEVLVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDDIKSLAEKLLHNPEEVEVARRNTASEQVTQHVHFVDKKRKRELLSYLI
GDGNWQQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKTGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKREIPRMAIPGYEPDPSIPAEPIVNGRQSRGGRGGQGGGGRGQGQPRRQNGEGNRS
SGERSRPAGNKPRTRRAPRKAAGD
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcactgggcttaagccctgagatcctgcgcgccattgccgagcagggt
tacaacgaaccgactccgatccagcgccaggccattccggtggtgctttcaggcaaagat
ttgatggccagcgcccagaccggcaccggcaaaaccgcaggctttacgctgccgctgctg
caacgcctgacggcgaaccagccgcacccgaaaggccgtcgcccggtgcgtgcgctgatc
ctgaccccgacgcgtgaactcgcagcccaggtgggcgagaacgtgcgcgaatacagcaaa
tatctcgacatccgctcgctggtcgtgtttggcggcgtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtggacgtgcttatcgcaacgccgggtcgtctgctcgatctcgaa
catcagaacgcggtgaagctcgaccaggtggaagtgctggtgctggatgaagccgaccgt
atgctggacatgggctttattcacgatatccgccgcgtgctggcgaaactgccgccgaag
cgtcagaacctgctcttctccgcgaccttctccgacgacattaaatcgctggcggaaaaa
ttgctgcataacccggaagaagtggaagtggcgcgccgcaacaccgcctctgagcaggtg
acgcagcatgtgcatttcgtggataaaaaacgcaagcgggagctgctttcttatctgatt
ggcgacggcaactggcagcaggtgctggtgtttacgcgcaccaaacacggcgctaaccat
ctggcggaacagctgaataaagatggcattaccgccgcggctatccacggtaacaagagc
cagggcgcccgtacccgcgcgctggcggatttcaaaaccggcggtattcgtgtgctggtg
gcaacagacatcgccgcgcgtggtctggatatcgaagagctgccgcacgtggtgaactat
gagctgccgaacgtgccggaagattacgttcaccgtatcggccgtaccgggcgcgctgcc
gcgaccggcgaagcgctgtcactggtgtgtgtcgatgagcataagctgctgcgcgatatt
gaacgcctgctgaagcgcgagatcccgcgcatggccattccgggctacgagccggatccg
tctatcccggcggagcctatcgtgaacggtcgccagagccgcggcggacgcggcggtcag
ggcggcggcggtcgtggtcagggccagccgcgtcgtcagaacggcgaaggtaaccgttca
tcgggcgaacgcagccgtccggcaggcaacaaaccgcgcacccgtcgcgcgccgcgtaaa
gcggccggggattaa
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