Chroococcidiopsis thermalis: Chro_5340
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Entry
Chro_5340 CDS
T02360
Name
(GenBank) GH3 auxin-responsive promoter
Organism
cthe
Chroococcidiopsis thermalis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
AMP-binding
Motif
Other DBs
NCBI-ProteinID:
AFY90705
UniProt:
K9U787
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Position
5997515..5999200
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AA seq
561 aa
AA seq
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MVNLVLSALNAVTDLTKANFIKKTRRTAEVQERFLLRLLQAHRDTEFGRKYQLGEIKTVD
RFRDRVPILPYSSYEPFLERIANGKQNILTADPVVYLTLTSGSTGKKKMIPTTRRSQNIT
RQATLTSMGFLTAALRSRGQQFGKILLTNSTQQWGRTSAGIPYGPASAGVLSMDKWLYGQ
FFAQPYETLQVADSSARHYLALLFALQDPLMRGMLANFPMLILRTCNYLEKFGEDLIHDI
ETGTIANWLEVEPELRLALEQRLSANPVRANELREILQSEGKLTPHLAWSNLSFVACARG
GTSDFYFQRFPTYFNNTPIFGAVFSSAEGMFSIYHELDDDSSILALESGFFEFIPQDQWQ
EEQPKTLLATEVRSGERYRILTTSYNGFYRYDIGDVIEVVGFYEQAPLIVFRHRQGGLIS
STTEKTTEAHATQVMQAVQQEFSLLLEDFCMTLSENDFPARYLLNIELANGYKLEDPQAF
LSECDRKLQAANTHYEISRKDPIPPPRLRILAPGSFAILRQRQIEKGIPDSQLKFPHISE
DRNFLSGLQVQQEVRLPEDEA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatctcgttctgtccgctttaaatgctgttacagatttgacaaaggcaaacttt
atcaaaaaaactcgccggacggcagaagtacaagaacggtttttattacgcttgttacaa
gctcatcgcgatacagaatttggtagaaaatatcagctcggtgagattaaaacagtcgat
cgctttcgcgatcgagtgccaattttaccgtattccagctacgaaccttttctggagcgc
attgccaatggcaagcaaaatatcctaacagccgatccggtggtgtacttgacgctgacg
agtggttcgacggggaaaaagaaaatgattccgacgacgaggcgatcgcaaaatatcact
cgtcaagctaccctaaccagtatgggttttctaaccgccgccttacgttctagagggcaa
cagtttggcaaaattctcctgacaaattctactcaacaatggggacgtactagtgctggt
attccctacggtcctgctagtgctggtgtcctcagcatggataaatggctgtacgggcaa
ttttttgctcagccatacgagactctccaagtcgcagatagctctgcccgtcactacctc
gccttattatttgccttacaagatcctttaatgcgggggatgttagctaactttccaatg
ctcatcctccgtacctgcaactatttggaaaaatttggtgaagacctaatccacgatatc
gaaacaggaaccattgccaattggttagaagtagaaccggaactacgactggcattagag
cagcgcttatcagccaatccagttcgagccaatgaattacgggaaattctccagtcggaa
ggtaagctcacccctcatctcgcctggtcaaatttgtcttttgtcgcctgcgcccgtgga
ggtacgtccgacttttactttcagcgattccctacctacttcaacaatacacccattttc
ggcgcagtattttcttctgccgaagggatgtttagtatctatcacgaactcgacgacgac
agcagcattttagccctggaaagcggtttttttgaatttatcccgcaagaccagtggcaa
gaagaacaaccgaaaacgctactcgctaccgaagtcagatcgggagaacgctatcgcatt
ctgactacgagctataacggattttatcgctacgatattggcgatgttatcgaggtagtc
ggattttacgagcaagcaccgctaatcgtatttcgtcaccgtcaaggtggattgatttct
tctacgacagaaaagacgacggaagcccatgcgactcaggtgatgcaagccgtacagcag
gaatttagcttattactagaagatttttgtatgactttatcggaaaatgattttcccgct
cgctacctgctcaatattgagttagctaatggctacaagcttgaagatccgcaagctttt
ttaagcgagtgcgatcgcaaattacaagcagcaaacacccactatgaaattagccgcaaa
gatccgattccgccaccccgactgcgaattttagctcctggtagctttgccatcctccgc
cagcgacagatagaaaagggcattcccgattctcaactcaagtttccccacatcagcgaa
gatcgcaatttcttatctggcttgcaggtacagcaagaagtgaggttaccagaagatgaa
gcatag
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