Thermochaetoides thermophila: CTHT_0000230
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Entry
CTHT_0000230 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K03253
translation initiation factor 3 subunit B
Organism
cthr
Thermochaetoides thermophila
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0000230
03012 Translation factors [BR:
cthr03012
]
CTHT_0000230
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
CTHT_0000230
Translation factors [BR:
cthr03012
]
Eukaryotic type
Initiation factors
eIF-3
CTHT_0000230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
RRM_1
Motif
Other DBs
NCBI-GeneID:
18254061
NCBI-ProteinID:
XP_006690578
UniProt:
G0RXS6
Structure
PDB
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MAPSFDHLREEDLDEEDIDMDEVDISDLREKYEVQLEQGYDTFVVIDGLPAVSEEQKPKL
IKFLLKKLNTVGKTREDMIYMPMGDDGMSLRFAFVEYSSPAEASAAVRQLDYVPLDKKHT
LRVNKLTDIDRYGREGRISEEFVPPKIEPFQEKEHLRWFMADPADRGRDQFVMYRGDTVG
VFWNNEKDQPENIVDRQHWTETFVQWSPLGTYLTSVHAQGVQLWGGASWSRLRRFPHPFV
NLVAFSPGEKYLVTWSNRPIQIPDSGHPVLTLDDDGKNYIIWDIETARPLRSFAQQDIHP
EEHGPKKGPPKFPWPVFKWSADDKYVARLNQGTSISIYELPKMNLLDKQAVKIEGVMDFE
WAPATVQREGVKTYEQLFCFWTPEIGNNPARVGLMSIPSKQIVRTLNLFSVSDVKMHWQS
EGTYLCVKVDRHSKSKKSQATTLEIFRVKEKGVPVEVVDTIKDTVINFAWEPKGDRFVII
TTPEPVGATAVPPKTSVSFFCPELKKGNQVGSFKHLRTLEKKNHNAIYWSPKGRFVVIAT
VHNTQSSDLEFWDLDFDGEKPENEKDLAACLQLMGTGDHYGITDVEWDPSGRYVATWASA
WKHTMENGYHLYDFKGELLREEHIEKFKQWQWRPRPPTLLTKEEQKQIRKNLREYSRIFE
QEDAERISSADVAVVEARRRLLNEWYAWREAIEKEVAEERAALGLPADPAAELLKRKIAE
VAPDAQEQVIEEIMEEVLEETEEIVN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgtcattcgatcacctgcgcgaggaagacctcgatgaggaggacattgatatg
gatgaggtcgacatctccgatctgagagaaaaatatgaggttcagcttgagcagggctac
gacaccttcgtcgttatcgacggtctgcctgccgtctccgaggagcaaaaaccgaagctc
atcaagttcttgctgaagaagctgaacaccgtcggcaagacccgcgaagacatgatctac
atgcctatgggtgatgatggcatgtcgttgaggttcgctttcgtcgagtactcttccccc
gctgaggcctctgccgctgtcaggcaactcgactatgtgcccctcgacaagaagcacacc
ctgcgtgtcaacaagctcaccgacattgaccggtatgggcgggaaggtcgcatcagcgag
gagtttgttccccccaagatagagccctttcaggagaaggagcaccttcggtggtttatg
gccgaccccgccgatcgcggccgcgaccagttcgttatgtacaggggagacaccgtcggc
gtcttctggaacaacgagaaggaccagcccgagaatatcgtcgacaggcaacattggact
gagaccttcgtccagtggtcgcctttgggcacataccttacttcggtgcatgcccagggt
gtccagctctggggtggtgcctcgtggtcccgtctgcgccgtttcccccaccccttcgtc
aaccttgtcgccttctcccctggtgagaagtacctggtgacctggtcgaaccgccctatc
cagatccctgacagcggtcatcccgtcctcaccctcgacgacgatggcaagaactatatc
atttgggatatcgagacggctagacccctgcgttcgttcgcccagcaggatatccacccc
gaggagcacggtcccaagaagggtcctcccaagtttccctggcccgtgttcaagtggtct
gccgacgacaaatacgtggctcggttgaatcagggcacctccatctccatctatgagctc
cccaagatgaacctgctcgacaagcaggccgtcaagattgagggcgtcatggacttcgaa
tgggcgcccgccacggtgcagagggaaggtgtcaagacctacgagcagctcttctgcttc
tggactcctgagatcggcaacaaccccgcgagggtcggtctcatgagcatcccctccaag
cagattgtgaggacgctcaacctcttcagcgtctcggatgtcaagatgcactggcagtcg
gagggtacctacctctgcgtcaaggtcgaccggcactccaagtccaagaagtcgcaggca
acgacgctcgagatcttccgtgtcaaggagaagggcgtccctgttgaggtggtcgatacg
atcaaggacactgttattaactttgcctgggagcccaagggcgaccgcttcgttatcatt
accactccggagcctgttggcgccaccgctgtgccacccaagacatcagtctctttcttc
tgccctgagcttaagaagggcaaccaggtcggcagctttaagcacctgcggactcttgag
aagaagaaccacaacgcgatctactggtcgcccaagggccgcttcgtcgtcattgctacc
gtccacaacacccagagctccgatctcgagttctgggatctggattttgatggcgagaag
cccgaaaacgagaaggacctggccgcctgcttgcaactgatgggtactggcgaccattat
ggtattaccgatgttgagtgggatccttcgggccgctacgtcgccacctgggcatcagcg
tggaaacacacgatggaaaatggctaccacctctacgacttcaagggcgagctcctgcgt
gaggaacacatcgagaagttcaagcagtggcagtggcgtccgcggccgccaaccctgctc
accaaggaggagcagaagcagatccgcaagaacctgcgcgagtattctcgcatcttcgaa
caggaggatgccgagcgtatcagctccgccgacgtggccgttgtcgaggcccgccgccgt
ctactcaacgaatggtacgcttggcgcgaggctatcgagaaggaggttgccgaggagcgt
gctgccctcggcctgcctgccgaccctgctgcggagctgctcaagcgcaagatcgccgag
gttgcgcccgacgcccaggagcaggtcatcgaggagattatggaggaggtgctcgaggag
accgaggagattgtcaactag
DBGET
integrated database retrieval system
