Chlamydia trachomatis L2b/Ams4: L2BAMS4_00646
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Entry
L2BAMS4_00646 CDS
T02576
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ctls
Chlamydia trachomatis L2b/Ams4
Pathway
ctls02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctls00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L2BAMS4_00646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctls03021
]
L2BAMS4_00646
Transcription machinery [BR:
ctls03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L2BAMS4_00646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
TatA_B_E
LpqV
Motif
Other DBs
NCBI-ProteinID:
CCP93398
LinkDB
All DBs
Position
complement(690943..692652)
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AA seq
569 aa
AA seq
DB search
MDTLDSQAAEAAQEEEIQRKLEELVTLAKDQGFITYEEINEILPPSFDTPEQIDQVLIFL
AGMDVQVLNQADVERQKERKKEAKELEGLAKRSEGTPDDPVRMYLKEMGTVPLLTREEEV
EISKRIEKAQVQIERIILRFRYSTKEAVSIAQYLINGKERFDKIVSEKEVEDKTHFLNLL
PKLISLLKEEDAYLEERLLALKDPALSKPDQARLNDELEKCRIRTQAYLRCFHCRHNVTE
DFGEVVFKAYDSFLQLEQQINDLKARAERNKFAAAKLAAARRKLHKREVAAGRTLEEFKK
DVRMLQRWMDKSQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFE
YRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEPTP
EELGEELGFTPDRVREIYKIAQHPISLQAEVGDGGESSFGDFLEDTAVESPAEATGYSML
KDKMKEVLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKMRH
PIRSKQLRAFLDLLEEEKIGSGKIKSYKN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatacgctagatagtcaagctgccgaggcagctcaagaagaagaaatccaaagaaag
ttagaagagttagtcactcttgctaaggatcaagggttcatcacgtatgaagaaatcaat
gaaattcttcctccttctttcgatacgccagaacagatcgatcaagttttaatttttctg
gcgggaatggatgttcaagtcctgaaccaagcagatgtagagcgacagaaagaaagaaaa
aaggaagcaaaagagctagaagggttagctaagcgttctgaaggaacgccagatgatcct
gttcgtatgtatttgaaagaaatgggaaccgttcctctacttactagagaggaagaggtg
gaaatttctaagagaatagaaaaagctcaagttcaaatagaaagaattattttgcgcttc
cgctattctacaaaggaagctgtgtcgatcgcgcagtatctcatcaatggtaaagaacga
tttgataagatcgtttctgaaaaggaagtagaagataagacacacttccttaatcttctg
cccaaactcatctctttattgaaagaagaagatgcatatttggaagagcggcttcttgct
ttaaaagatccggcgttgtccaagccagatcaggcaaggttgaatgacgagctggagaaa
tgccgtatccgtacacaagcgtatttgcggtgtttccattgtcgtcataatgtgacggaa
gatttcggagaggtggtttttaaggcttatgattcattcttgcagttagaacagcaaatc
aatgatttgaaagcgcgagctgagagaaataagtttgccgcagcgaaacttgctgcggcg
cggcgaaagcttcacaagcgtgaggtagcggctggacgcactcttgaagagtttaaaaaa
gatgtgcggatgttacagcgttggatggacaagagccaggaagccaaaaaagagatggtc
gaatccaacttacggttggtaatttccatcgcgaaaaaatataccaacagagggctgtct
ttcttggatctgattcaagaaggtaatatgggcttgatgaaggctgttgagaagtttgag
tatcgtagaggatacaagttttcaacttatgccacgtggtggattcgtcaggctgttaca
cgggctattgcggatcaagcacgaacgatccgcattcctgttcacatgatagaaaccatc
aataaagtgcttcgtggagctaaaaaattaatgatggaaacagggaaagagcctactccg
gaagagctcggagaggaattgggctttactccagatcgtgttcgagaaatctataaaata
gctcaacacccgatttctttgcaggcagaggtcggagatggtggggagagctcttttgga
gatttcttggaagatactgctgttgaatctccagcggaggcaacagggtattccatgtta
aaagataaaatgaaagaagttttgaaaacgcttacggaccgtgagcgttttgttttgatt
catcggtttggtcttcttgatggtcgtcccaagactttggaagaggtgggttctgcattc
aatgtaacacgagagcggattcgccaaattgaagctaaagctttacgaaagatgcgtcat
cctatccgttccaaacagttgcgagcgttcctagatctattggaagaagaaaaaattggt
tcgggtaagattaaaagttataaaaattag
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