KEGG   Chlamydia trachomatis L1/1322/p2: L11322_00064
Entry
L11322_00064      CDS       T02557                                 
Name
(GenBank) RNA polymerase sigma factor sigma-28
  KO
K02405  RNA polymerase sigma factor FliA
Organism
ctrp  Chlamydia trachomatis L1/1322/p2
Pathway
ctrp02020  Two-component system
ctrp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ctrp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L11322_00064
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    L11322_00064
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctrp03021]
    L11322_00064
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:ctrp02035]
    L11322_00064
Transcription machinery [BR:ctrp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L11322_00064
Bacterial motility proteins [BR:ctrp02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    L11322_00064
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_23 GerE Sigma70_ECF HTH_10
Other DBs
NCBI-ProteinID: CCP62988
LinkDB
Position
71689..72450
AA seq 253 aa
MKTHDLADTWQLYWSTKEIHHRDVLIESYLPLVKNVAHRLASGMPSHVKMEDLYALGVEG
LIRAVERFDPEKSKRFESYALFIIKAAIIDGLRKQDWVPRSVYQRANRLADAMDSLRQTL
GKEPTDGELCEYLNISQQELSHWFSSSRPALVLSLNDDFSCQDDDEGLALEERIADERAE
TGYDVIRKKEAISILTEALLALDEKERQVMALYYYDDLVLKEIGKILGVSESRVSQIHSK
ALLKLRGTLSSLL
NT seq 762 nt   +upstreamnt  +downstreamnt
gtgaagactcacgatctcgcagatacttggcagctatattggtcgacaaaagaaatccat
catagggatgttttgatcgaatcctaccttcctttagtaaagaatgtagcgcatcggctt
gcttcaggaatgccttctcatgtaaagatggaagatctttatgctctgggggttgaaggg
ttgattcgtgctgtcgaacgttttgatccagaaaaaagcaagcgattcgagagctatgct
ctttttatcataaaagctgcgattattgatggattgcgcaaacaggattgggtaccacgc
agtgtttatcaaagagccaatcgattagctgatgcgatggattctttgagacagacttta
ggtaaagaacctactgatggagaactttgtgagtatctaaatatttcacaacaagagtta
tcccattggttttcctcctctagacctgctctagttctttctttaaatgatgatttctcc
tgccaagatgacgatgaggggcttgctttagaagagcgcatagcagatgagcgagcggaa
accggatacgatgtcatcagaaaaaaagaagctatttctattttgacagaagctttgctg
gctcttgatgaaaaagagcggcaggttatggctctttattactatgatgacttggtatta
aaagaaattgggaagattttaggagtgagcgagtcccgagtttctcagatacactccaaa
gctttattgaagttacgaggtacattgtccagtctgctttag

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