KEGG   Chlamydia trachomatis A/363: A363_00654
Entry
A363_00654        CDS       T02562                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ctrq  Chlamydia trachomatis A/363
Pathway
ctrq02020  Two-component system
ctrq02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ctrq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A363_00654
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A363_00654
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ctrq03021]
    A363_00654
Transcription machinery [BR:ctrq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A363_00654
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_23 DNA_pol3_delta_C HTH_11 Terminase_5
Other DBs
NCBI-ProteinID: CCP48006
LinkDB
Position
691284..692594
AA seq 436 aa
MLHQHQTASVALCPALHLQQGLDMLQMPVAELATFVSQQITINPCFDLDSLDSPPESFSF
FPISEQHPFTETLSAYLLRQIDTNFASSQERTIAQYIVGNLSPEGLFLENPSLVAADLNV
SEHLFHKVWQRIQQLHPLGVGAPSLQSYWVSLLQTSPHKEALAIIRNHFPRLARCDFTTI
ARKMHATTTEILTFLRHAFASIPWCPAAGFSETLHPPAPALPDAYLSFSRNSSWDVSINK
DCLPSIRLNNTVLDIYPSLPREEKDHLSQQIRAAKQLLRNVKKREETLLAILRVLIPYQE
EFLLKKRTSPKAFSVKQIARELSLHEATVCRAIDNKTLATPVGLLPMRSLFPQAVGSCPD
QSKATILHWIHQWISTEKHPLSDAAISQKIIEKGIPCARRTVAKYRSQLNILPAHQRKHL
CSVLTTTRTENSRHTI
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgttgcatcagcatcaaacagcatctgtagctctttgtcctgctttacatcttcaacag
ggactggatatgctacagatgccagttgctgaactcgcaacatttgtgtcccagcaaatc
actatcaatccctgttttgatctcgatagcttagattctcctccagaatctttttcgttt
ttccctattagcgaacagcatccttttacagaaactctatccgcataccttcttcggcaa
attgataccaattttgcctcttctcaggaacgtactatagctcagtatattgtaggcaac
ctctccccagaaggactctttttagaaaatcctagtcttgtggctgcagatttaaacgtc
tccgaacaccttttccacaaggtatggcaacgtatccaacaattacatcctttaggagtc
ggagcgccttccctacagtcctactgggtatcgctactacagacatctccccataaggag
gctttagctattattcgcaaccatttccctagattagctcgttgtgatttcactactatc
gctaggaaaatgcatgcaaccacaacagagattcttacgtttcttagacacgcttttgct
tccatcccttggtgtccagcagcaggcttttccgagacacttcacccccctgctccagcg
cttcctgatgcctacctttccttctcgcgaaactcttcttgggatgtctctattaataaa
gattgtctcccctctattagactcaacaacaccgtactagatatctatccttctcttcct
cgtgaagagaaagaccacctatcgcaacaaatccgagcagcaaaacaattgcttcgcaat
gtaaaaaaacgagaagaaacgttattggctatccttcgagttctcatcccctaccaagaa
gagttccttcttaaaaaacgcacctctcctaaagctttttctgtaaaacaaatagctcgc
gaactctctcttcatgaagctaccgtttgtcgtgccattgataataaaacgttagcaacc
cctgttggattactccctatgcgatcgctatttccacaagcggttggatcctgccccgat
caatctaaagcaactattttgcattggatccaccagtggatttctacagaaaaacatcct
ctatctgatgcagctattagccaaaaaattattgagaagggcatcccctgcgcacgacgc
acagtagccaaatatcgttcgcaactgaatatcctccctgcgcaccaacgcaaacaccta
tgctctgttttaacaacaacacgcacagagaattctcgacatactatctaa

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