Comamonas thiooxydans: CtCNB1_1630
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Entry
CtCNB1_1630 CDS
T01109
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ctt
Comamonas thiooxydans
Pathway
ctt03030
DNA replication
ctt03430
Mismatch repair
ctt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CtCNB1_1630
03430 Mismatch repair
CtCNB1_1630
03440 Homologous recombination
CtCNB1_1630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctt03032
]
CtCNB1_1630
03400 DNA repair and recombination proteins [BR:
ctt03400
]
CtCNB1_1630
Enzymes [BR:
ctt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CtCNB1_1630
DNA replication proteins [BR:
ctt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CtCNB1_1630
DNA repair and recombination proteins [BR:
ctt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CtCNB1_1630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
DNA_pol3_tau_5
AAA_18
AAA_30
AAA_14
AAA_19
AAA_16
Rad17
SKI
nSTAND3
AAA_28
PIF1
TsaE
Herpes_Helicase
AAA_assoc_2
DUF815
Motif
Other DBs
NCBI-ProteinID:
ACY32376
LinkDB
All DBs
Position
1846905..1849064
Genome browser
AA seq
719 aa
AA seq
DB search
MSYLVLARKYRPRTFTEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCQGLDGNGGITATPCGVCAACTEIDSGRFPDYTELDAASNRGVDEVQSLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVLEHLTHVLDKESVPAEPQALRLLSRAARGSMRDALSLTDQAIAFGSGQLQEA
TVRQMLGSVDRSHVFRLIDALAQGHGRTVVEVSEELRHNGLSAASTLEEMCAVLQRMAVL
QAVPDMPLDASDPEAAEVDRLASLMPRDETQLLYSICLHGRAELGLAPDEYAALTMALLR
LLAFKPENAEAGMAEKKTPALRPSRPVVQAPDPIQQSPASTPAAMEAPPAKVQSVQPVVE
SALESAPVQEPASVAGMAEPEHIQVVADRSDSAEYSVARPVMQAVPESTRLPAPAVTPEP
AAVRQNLPAEDQEAVAEADQRPVDDASESAEGSDMADAPEEQDASEAAWAGMPDEGWSDD
GRWGDDADLDIGQPPHAMPPMESDEPAAQSASGGYVSTAQDAAPVERTAEGDLWFGVVQQ
LLQSEAVVAVARQLALQSQLLGRDGDLWRLRVESNSLNQAGTRDRLRAALEAAGHARQLQ
VEQGPVTDSPARRLALERKASQLLAEDIVKSNLQVQTLMRDFGAKIVPGSIKPISIQPE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatttagtgcttgctcgcaaataccggcctcgtaccttcaccgaaatggtgggg
caggagcacgtggttcaggctctgaccaatgcgttgacccagcagcgtctgcaccatgcc
tatctgttcacgggcacacgtggcgtgggcaagaccacggtgtcgcgcattctggccaag
tccctgaattgccagggcctggacggtaacggtggaatcaccgcaaccccttgcggggtt
tgtgcagcatgcactgaaatcgatagcgggcgtttccccgactacaccgagctggatgct
gcgtccaaccggggtgtggatgaggtgcagagcctgctggagcaggcggtgtacaagccg
gtgcaggggcgcttcaaggtcttcatgatcgacgaggtgcacatgctgacaaacaccgcg
ttcaacgccatgctcaagacgctggaagagcctccggagtatctgaagttcgtgctggcc
acgaccgatccgcagaaagtgccggtcactgtgctctcgcgctgcctgcagttcaatctg
cgcccgatggcgcccgagacggttctggagcacctgacccatgtgctggacaaggaaagc
gtgccggcagagcctcaggcgctgcgattgctgtcgcgtgctgcgcgtggctccatgcgc
gatgcgctgagcctgaccgaccaggcgattgcctttggcagcgggcagttgcaggaggcg
acggtgcgccagatgctgggcagcgtggatcgcagccatgtctttcgcctgatcgatgcc
ttggcgcagggtcacgggcgtacggtggttgaagtctccgaagagctgcgccacaacggt
ctgtctgctgcatcgacactggaggaaatgtgcgccgtgctgcagcgcatggccgtgttg
caggccgtacccgatatgccgctggatgccagcgacccggaggctgccgaagtagaccga
ctggccagtctgatgccgcgcgacgagacccagctgctctacagcatctgcctgcacggc
cgtgccgaactggggctggccccggatgagtacgctgcgctgaccatggcactgctgcgg
ctgctggccttcaagccggaaaacgccgaagccggcatggctgaaaaaaaaactccggcg
ctgaggcctagccggcctgttgtccaggctccggatccgattcagcagtctccggcttca
acgccagcggcgatggaggcgccaccggccaaggttcagtccgtgcagccggtggtggaa
tccgcactggagtccgcaccggtgcaggagcctgcgtcagtggccggcatggccgagcca
gaacatattcaagttgttgccgatcgctcggattcagcagagtattccgtcgcaaggccg
gtgatgcaggcagtgccggagtcgacccgcttgcctgctcctgcagtgacgcctgagcct
gctgcggttcggcagaacctgcctgctgaggatcaggaggccgtcgccgaggcagaccag
aggcctgtcgacgatgcgtccgagagtgcagagggcagcgatatggctgatgctcccgaa
gagcaggatgccagcgaggcagcctgggcaggcatgcccgatgagggctggtctgacgat
gggcgctggggcgatgatgccgacctggatatcggacagcccccgcatgccatgccgccc
atggagtctgacgagccggcggcccagagcgcaagcggtggctatgtcagcacggcccag
gatgcagcccctgtggagcgcacagccgagggcgatctgtggtttggcgtggtgcagcag
ttgctgcagagcgaagccgtggtggccgtggcgcggcagctggcgctgcagtctcaactt
ctgggccgcgacggcgatctgtggcggctgcgcgtggagtccaactcgctcaatcaggct
ggcacacgtgatcgtctgcgtgctgcgctggaagcggccggtcatgcgcgacaattgcag
gttgagcaggggccggtgacggatagtcccgcccgccgactggccctggaaagaaaagcc
agccagttgctggccgaggacattgtcaaaagcaatctgcaggtgcaaaccttgatgcga
gactttggcgcgaaaatcgtgcccggtagcatcaagcccatatctattcagcctgaataa
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