Corynebacterium ulcerans BR-AD22: CULC22_01377
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Entry
CULC22_01377 CDS
T01549
Symbol
gpsI
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cul
Corynebacterium ulcerans BR-AD22
Pathway
cul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CULC22_01377 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cul03019
]
CULC22_01377 (gpsI)
03016 Transfer RNA biogenesis [BR:
cul03016
]
CULC22_01377 (gpsI)
Enzymes [BR:
cul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CULC22_01377 (gpsI)
Messenger RNA biogenesis [BR:
cul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CULC22_01377 (gpsI)
Transfer RNA biogenesis [BR:
cul03016
]
Prokaryotic type
tRNA degradation factors
CULC22_01377 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
AEG84087
LinkDB
All DBs
Position
complement(1524034..1526337)
Genome browser
AA seq
767 aa
AA seq
DB search
MTVVRRNIHEETCTLSKAKNIEFNVDEEFGITEAIATIDNGDFGTRTIRFETGQLAKQAD
GSVTTYLDDETMLLATTTASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTE
AILACRLIDRPLRPTFVKGLRNEVQVVITVLSMNPEDYYDVVAINGASAATQLSGLPVSG
AVGGVRMALIADEAHPKGQWIAFPTHEQHEKALFELVVAGRLVAKKQGRKTVEDVAIMMV
EAGATENVVEKIKDGAPAPTEEIVAQGLEAAKPFIEVLCRAQAGLAERAAKETQEFPLFP
PYSDVIYDAVEKKVSKKLRQLLTIKSKQERDDATNDYMESIEGELLAKFGSEDEAAASKA
IRAAYNAVMKKLVRHMILTEHFRIDGRGVTDIRDLGVEVELIPRAHGSALFERGETQILG
VTTLDMLKMEQQIDSLSPTSSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALM
PVIPSREEFPYTIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDE
VDGETRYVALTDILGAEDAFGDMDFKVAGTRDFVTALQLDTKLDGIPSKVLASALAQAYE
AREAILDTMAEVIESPDAMSDYAPRITTVTVPVSKIGEVIGPKGKTINSITEETGANISI
EEDGTVYVSATSGAAAEAAIEKINAIANPQLPKVGERFLGTIVKTTAFGAFVSLVPGRDG
LIHISKLGNGKRIEKVEDVVNVGDKVEVEILDIDNRGKISLAPVKED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgtgagaaggaatatccacgaggagacctgcactttgagcaaggcaaaaaac
atcgaattcaacgtagatgaagaattcggtattaccgaagcgatcgccaccattgacaac
ggcgacttcggaacccgtaccattcgctttgaaactggccagttggccaagcaagccgat
ggctctgtcaccacttacttggatgatgagacgatgctgttggctaccacgacggcttcc
aaccagccgcgtgaaggattcgacttcttcccactgacggtggacgtcgaggagcgcatg
tacgcagcgggccgcattccgggttcgtttttccgtcgcgagggccgcccctccactgag
gcaattttggcttgccgcctgatcgaccgtccgctacgtccgacttttgttaagggactg
cgcaacgaggtccaggtcgttatcaccgtcttgtccatgaacccagaagactactatgac
gttgttgcgatcaacggtgcgtcagctgctacccagctttccggtctgccggtatcgggt
gctgtaggcggagttcgcatggctcttatcgcggatgaagcacatcccaagggccagtgg
attgcgttcccgacccatgagcagcacgagaaggctctttttgaactcgtcgttgcagga
cgccttgtcgctaagaaacagggacgcaagactgtcgaagacgttgccatcatgatggta
gaagcgggtgcgactgagaacgtcgtagaaaagatcaaagatggcgctcctgcgccgaca
gaagagatcgttgcacaaggcctagaagcagctaagcctttcatcgaggttttgtgccga
gcccaggctggcctggcagaacgtgcagcgaaagaaactcaagaattcccacttttccca
ccttattcggacgttatttacgatgccgtggaaaagaaagtttctaagaaactgcgtcag
ctgttgactattaagtcaaagcaagagcgtgacgacgccacgaacgactacatggagtcg
atcgagggcgagttgctcgcaaaattcggttctgaggatgaagctgccgcatcgaaggct
atccgcgctgcttataacgccgttatgaagaagctcgtgcgccatatgattctcaccgag
cacttccgcattgatggtcgtggagtcaccgatattcgtgatcttggggtagaagtagag
ctcattcctcgtgcacacggttcggctctatttgagcgcggtgagacacagatcttgggc
gtgaccacgctagacatgctcaagatggagcagcagattgattcgttgtcacccacatcg
tccaagcgctacatccaccactacaacttcccgccgtattccaccggagaaactggccgt
gtggggtccccgaagcgccgcgagatcggccatggagcgcttgcagagcgcgcccttatg
ccagtgattccttcccgcgaggagttcccttacaccatccgtcaggtttcggaagccctc
ggatctaacggctctacctccatgggttcagtgtgtgcatcaacactctcgctgtacaac
gcgggtgttccgctgaaggcccccgtggctggtattgctatgggtctggtgtctgatgaa
gttgacggagaaacccgttatgttgctttgacagacatccttggcgctgaggatgctttc
ggtgacatggacttcaaggttgctggaacccgtgactttgtgacggccctgcagctggac
accaagcttgatggcattccttccaaggttctcgcgtctgcgcttgctcaggcttatgag
gctcgcgaagcaattctggacactatggctgaggtcattgagagcccagacgcgatgagc
gattatgctccgcgcatcacgactgtcaccgttccagtcagcaagatcggtgaggttatt
gggcctaagggcaagacgatcaactcgatcaccgaggagaccggggcaaacatctccatc
gaggaagacggaactgtgtatgtttccgcgacctcaggtgctgccgctgaagcagcgatc
gaaaagatcaatgctatcgctaatccgcagttgcccaaggttggcgagaggttcctcgga
accatcgttaagaccactgcctttggtgcatttgtttctcttgtgcctggtcgtgacggc
ctcatccacatctctaagctcggcaacggtaagcgcatagagaaggtagaagacgtagtc
aacgttggtgacaaagtcgaggtggagatcctcgacatagacaaccgcggcaagatttcc
ttggcaccagtgaaggaagactag
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