KEGG   Chlorella variabilis: CHLNCDRAFT_138420Help
Entry
CHLNCDRAFT_138420 CDS       T02924                                 

Definition
(RefSeq) hypothetical protein
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
cvr  Chlorella variabilis
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cvr00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    CHLNCDRAFT_138420
Enzymes [BR:cvr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CHLNCDRAFT_138420
DNA repair and recombination proteins [BR:cvr03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CHLNCDRAFT_138420
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
Unknown
AA seq 1063 aa AA seqDB search
MLLPPNDLSFQTLVNFFSSCRKLLGNARKGGDVRSQHVKRFIDVNIDKESHQAFAVFRLI
LPAVGAGSAVLLDNKRGNYKLLESNLINVLLKAAGIDKKSKEASTIRNWKRPGSKSAGDF
AAVLQENIFNVYCMIDPTDGTGRLKTLKVGQLNQALDKLVEAAGNFNEQANILRGLMQVT
SPDQMAWIVQIILKNLKINVGEGKVLKTWHKDAETYYNQSGMDLEHIFNEMVATSENYAT
SIQPGKAVRPQLLKMTGSVKWAFSKAMHDEDGKLKEFVVEMKLDGERIQVHRGPRDEISY
FSRRAIEHGEKSNYSVVDDMIRRYTRGPCVLDGELIVWNKKEQVFEPFGSLKPLISAILE
QKHRGDVLDFNEMEEDAAIHDEDYKAPQIGDLELVYVTFDILHNGKGGVIDMPLRERHKM
LEDKVVPGIPADRTHFGSILASRTGRTEEDISQMLQEIVRLREEGIVIKALDSVWVSNDR
HSNNWLKVKPDYIANIELDCLVIGAWGGKGGRGGHYTQYLLALADDPPAGQQVGTGTDRS
EWEAVHRQIEPLCIDASKHPPPCFYSVTGREKPEVWISDPKESVVVQISADLRTIRSTQF
KTGYSLRFPKVHSVRWDKTATIVSSIKDLQGRVEEQKKKDENIDWVKGQDGDTGKKRRTT
KRDKGPAAKRLRGREVVEVESSVLEGCHIAFANYGEHNKRQLEEIVKKLGGETRFMFTEG
SGVTHILAGREDNKVKAHKEHDRDVISIDWLVACDRQKRRVPLRPRYYIHMSRANLIANP
DVDSLGDSYMSDVDEGDVDNLLHRAVRPGAVDPAALAEGLAHPSEFEDSNEEQVAKAQRQ
LTRRLGSADAGRAVGSYLDAQLAAIGQLDPRFSCLRPFSAVLLRLGNGKAIRQPDGDSQR
RLVPSVQSILLAGAASQARLQQLQAAAVAAEFRIMGGALAVALGQSVTHVLGLVLARAPS
VVATDEGSSTGAASAVEPQALLRAVDDQAGGPPAVALLKLGLATGSIQLETDRWVHRCLD
EAENRAAAGQMGTAKLPPEAAFLLDVANLDNPDGHLPQPPKRR
NT seq 3192 nt NT seq  +upstreamnt  +downstreamnt
atgcttctgccgcccaacgacctgagctttcagacgctggtcaacttcttctcgagctgc
cggaaactcctgggcaatgctcgcaagggaggagatgtccgcagtcagcatgtcaagcgg
ttcatagacgtgaacatcgacaaggaatcccaccaggcttttgcggtattccggctgatt
ctgccggcggtgggtgctggcagcgcggtgctgctggacaacaagcgtggcaactacaag
ctgctggagtccaacctcatcaatgtgctgcttaaggcggcaggcattgacaagaagtcg
aaggaggcctccaccatccgcaactggaagcggccggggtccaagagtgcaggggacttt
gccgctgtcctgcaggaaaacatcttcaatgtgtactgcatgattgaccctaccgatggc
accggcaggctcaagacgctcaaggtgggccagctgaaccaggcactggacaagcttgtg
gaggcggctggcaacttcaatgagcaggccaatatactgagggggctcatgcaggtcacc
tcacccgaccaaatggcctggattgtccaaattatcctcaagaatctcaagatcaacgtt
ggggagggcaaggtgctgaaaacctggcacaaagacgcggagacatactacaatcagagc
ggcatggatttggagcacatcttcaacgagatggttgccaccagcgaaaattatgccact
agcatacagcccggcaaggcggtgcggccccaactgctgaagatgactggcagtgtgaag
tgggcatttagcaaggccatgcacgacgaggatgggaagctgaaggagtttgtggtggag
atgaagctggatggcgagcgcatacaggtgcaccgcggcccccgggacgaaatctcgtac
ttttcgcgtcgggccatcgagcatggcgagaaatccaactacagcgtggtggacgacatg
atccggcgatacacgaggggcccatgcgtactagatggcgagctgattgtgtggaacaag
aaggagcaggtgtttgagcccttcggaagccttaagccactcattagtgccatcctggag
cagaagcaccgtggcgatgtgctcgattttaatgagatggaggaagatgctgccatccat
gatgaagactacaaggcaccgcagataggggacctggagctggtgtatgtcacgtttgac
atactgcacaacggcaagggtggggtgattgacatgccgctgagggagcgtcacaagatg
ctggaagacaaggttgtgccaggaattccagcagacaggacacactttggatccatcctc
gcctctcgcaccggccgcacggaggaggacatttctcagatgctccaggagattgtgcgc
ctgagggaggagggcattgtcatcaaggccctggacagtgtatgggtgtccaatgaccgg
cactcaaacaactggctcaaggtgaagcctgactacatagcaaacatcgagcttgactgc
ttggtgattggggcgtgggggggcaagggagggcgtggcgggcactacacgcagtacctg
ctggccctggcagacgacccaccagctggccagcaggtgggcactggtacggacagaagt
gaatgggaggcggtgcaccggcagattgagccgctgtgcatcgatgccagcaagcacccg
ccgccgtgcttctacagcgtcacgggtcgggagaagcctgaagtgtggatcagcgacccg
aaggagagcgtggtggtccaaatcagtgccgatctgcggactattcgctctacacagttc
aaaacgggctactcgctgcggttcccaaaggtccactctgtcaggtgggacaagacggcc
accattgtcagcagcattaaagatttgcagggaagggtggaggagcagaagaagaaagat
gaaaacatcgactgggtgaagggacaggatggcgacactgggaagaagcgccgcaccacc
aagcgcgacaaggggccggctgccaagcgcctgcggggccgcgaggtggtggaggtggag
agcagcgtgctggagggctgccacattgcctttgccaactatggagaacacaacaagcgg
cagctggaggagatcgtgaagaagttggggggcgagacgcgtttcatgtttacagagggc
tctggtgtcacccacattctggctggccgtgaggataacaaagtcaaggcgcacaaggag
cacgaccgagacgtgatcagcattgactggttggtggcgtgcgatcgccagaagcgccgc
gtgccgctcaggcctcgctactacatccacatgagccgcgccaacctcatcgccaatccg
gatgtggatagccttggcgactcctatatgtcagatgtggacgagggagatgtcgacaac
ctgctgcaccgcgcagtgcgccccggtgctgtggatcctgccgcattggcggaggggctg
gcgcatccctcagagtttgaggacagcaacgaggagcaggtggcaaaggcacagcgccaa
ctgacccggcggctgggaagcgcggatgcgggtcgtgcggtgggttcctacctggacgca
cagctggcggccatcgggcagcttgacccccgcttttcctgcctgcgccccttcagcgcc
gtgctgctgcgcctgggaaatggcaaggccatcaggcaacctgatggtgacagccagcgc
cggcttgtccccagtgtccaatccatcttactggcgggtgccgcgtcgcaagcgcggctg
cagcaactgcaggcagcagctgtggctgcggagttccgcatcatgggcggcgcactggca
gtggcgctggggcaaagcgtgacgcacgtcttggggctggtgttggccagggcgccttcg
gtggtggcaaccgatgaaggcagctcaacaggagcagcatcggcggtggaaccgcaggca
ctgctgcgtgctgtggatgaccaggcgggagggccaccagctgttgccctcttgaagctg
gggctggccacgggcagcatacaactggagaccgacagatgggtgcaccgctgcctggac
gaggcagagaacagagcggcagcggggcagatgggcacggccaagcttccgcctgaagca
gccttcttgctggacgtggccaatctcgacaaccctgatgggcacctgccgcagccaccc
aagcgaagatag

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