Cyanothece sp. PCC 7425: Cyan7425_0488
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Entry
Cyan7425_0488 CDS
T00836
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cyn
Cyanothece sp. PCC 7425
Pathway
cyn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cyn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cyan7425_0488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cyn03021
]
Cyan7425_0488
03400 DNA repair and recombination proteins [BR:
cyn03400
]
Cyan7425_0488
Enzymes [BR:
cyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cyan7425_0488
Transcription machinery [BR:
cyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cyan7425_0488
DNA repair and recombination proteins [BR:
cyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cyan7425_0488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF5887
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ACL42880
UniProt:
B8HTW0
LinkDB
All DBs
Position
complement(288567..291866)
Genome browser
AA seq
1099 aa
AA seq
DB search
MTNTIYTPPAFTLPDLVEIQRESFRWFLEEGLIEELESFSPITDYTGKIELHILAKDYKL
KRPKYSVDEAKRRDSTYAVQMYVPTRLINKETGEIKEQDVFIGDLPLMTDRGTFIINGAE
RVIVNQIVRSPGVYYKSEVDKNGRRTYNASLIPNRGAWLKFETDKNDLVWVRIDKTRKLS
AQVLLKALGLSDAEIFDRLRHPEYYQKTIDKEGQFNEEDALMELYRKLRPGEPPTVSGGQ
QLLDSRFFDPKRYDLGRVGRYKLNKKLRLNVPETTRVLTSEDILAAIDYLINLEYDIGMI
DDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDTDALTPASLVNPKPLVAAI
KEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPIE
TPEGPNAGLIGSLATHARVNEYGFIETPFYPVKDGRVLKDQAPVYMTADEEDDKRVAPGD
VSTDADGHILGEVVPVRYRRDFTTTTPDQVDFVAVSPVQIISVATSLIPFLEHDDANRAL
MGSNMQRQAVPLLRPHRPLVGTGLEAQAARDSGMVVTTRSDGEVSYVSADVIRVRATQGH
EIEYPLQKYQRSNQDTCLNQRPIVFAGDKVTAGQVIADGSATEGGELALGQNVLIAYMPW
EGYNYEDAILISERLVYDDVYTSIHVEKYEIEARQTKLGPEEITREIPNVGEDALRQLNE
NGIIRTGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGR
VVDVRVFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPQEDMPY
LPDGTPVDVVLNPLGVPSRMNVGQVFECLLGWAGYHLGARFKITPFDEMHGAEASRLTVH
GKLDEAKELTGRDWVFDPDNPGKTQIFDGRTGEAFDRPVTVGKAYMLKLVHLVDDKIHAR
STGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDMQGRNEALN
AIVKGQAIPRPGTPESFKVLMRELQSLCLDIGVHKVEATEDGSNRDVEVDLMADVNNRRT
PSRPTYESFSRADMEDGDF
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgactaatacgatttataccccacccgcctttactctccctgacctggttgagattcag
cgggagagcttccgttggttcctggaagaaggattaattgaggaactcgaaagtttttca
cctattactgactatacaggcaaaattgaactacacatcctggcgaaggactataagctc
aagcgtcccaagtacagcgtcgatgaagccaagcgccgagacagcacctatgctgtgcaa
atgtacgttccgacgcgtctgatcaataaagaaactggggaaattaaagagcaggacgtt
ttcatcggtgatcttcccctcatgaccgatcggggcaccttcattatcaacggtgctgaa
cgggtgatcgtcaaccagatcgtccgtagccctggggtgtattacaagtcagaagtcgat
aaaaatggtcggcgcacttacaatgccagcctgattcccaaccggggagcctggttaaag
tttgaaactgacaaaaatgacctggtttgggtgcggattgataaaacccgtaaactgtct
gctcaggttttactgaaggctctggggctgagtgatgcagaaatttttgaccgactgcgc
caccccgaatactaccaaaaaacgatcgacaaggaagggcagttcaacgaagaagatgcc
ctgatggagctttaccgcaaattgcgtcccggtgaacctcccacggtgtctggggggcag
caattgctagactcccgcttttttgaccctaaacgctacgacctgggccgggtgggtcgt
tacaagctgaacaagaaattgcggctgaatgtccccgaaaccacgcgggtactcacctct
gaagatattctggcggcgatcgactacctgatcaacctggaatacgacatcggcatgatt
gacgacattgaccacctgggtaaccgccgggtgcgctctgtcggtgaactgctgcaaaat
caggtgcgggtgggcttaaatcggttagagcggattattcgggagcgtatgacggtttcc
gatacggatgccctcacccctgcttctctggtcaaccccaaacccctggtcgctgcgatc
aaagaattctttggctccagccagttgtcccagttcatggatcaaaccaatccgctggca
gaattgactcacaaacgtcgtctcagtgcgcttggtcctggcggtctgacgcgggaacgg
gcaggctttgcggtacgggatattcaccccagccattatgggcggatctgtccgattgaa
accccagaaggtcccaacgctggcttgatcggctctctggcaacccatgctcgcgtcaac
gagtacggctttattgaaacccctttctatccggttaaagatggacgggtgctcaaggat
caagccccggtttacatgactgcggatgaagaagatgacaaacgggtagctcctggggat
gtttccaccgatgccgatggccatattctcggtgaagtggtacctgtgcgctatcgacgg
gactttaccaccaccaccccggatcaggtggattttgtcgccgtttccccggtgcagatt
atctctgttgccacctctctgattcccttcctggagcacgacgatgccaaccgggccctg
atgggttccaacatgcaacggcaggccgtacctctactgcgtccccaccgtcctctcgtt
ggaacgggcttggaagctcaggcagcgcgtgactccggcatggtggtgactacccgatcg
gatggagaagtgagctatgtttcagcggatgtaattcgagttcgcgctactcaggggcat
gaaattgaatatccgttgcaaaaataccagcgatcgaaccaggatacctgtctgaaccag
cgcccgatcgtctttgccggtgacaaggtcacagccggccaggtcattgctgacggttct
gctaccgaaggcggtgaacttgccctgggtcagaacgtcctgatcgcttatatgccctgg
gaaggctacaactacgaagatgccattctgatcagtgagcgtctggtctacgatgatgtc
tacacctcaatccacgtggaaaaatatgagattgaggcccggcagaccaaactaggacca
gaagaaattacacgggaaattcccaacgttggggaagatgccctgcgccaactgaacgaa
aacggcattatccggactggagcctgggtggaagctggagacattctggtcggcaaagtg
acccccaaaggggaatcagatcagcctccggaagaaaaattgctgcgagcgatcttcggt
gaaaaggcccgggacgtgcgggataactccctacgagtgcccaacggtgaaaaaggccgg
gtggtggatgtgcgggtgtttacccgggaacagggggatgaactaccaccgggagccaac
atggtggtgcgagtctacgtcgcccaaaaacgcaagatccaggttggggacaagatggcg
ggtcgccacggtaataaggggattatctccaggattctgccccaggaagatatgccctac
ctgccagatggcacgcccgtcgatgtggtgttgaaccccctgggggtaccctcgcggatg
aatgtcggccaggtgttcgagtgtttgctcggttgggccggttatcatctgggagcccgg
tttaagatcacgccctttgatgaaatgcacggggccgaagcctctcgcctcactgttcac
ggcaagctggatgaagccaaagaactcaccgggcgggattgggtgtttgatccagacaat
cctggtaaaactcaaatttttgatggtcgtacgggagaagctttcgatcgcccggtcacg
gttggcaaagcctacatgctcaaactcgtccacctggtagatgacaagatccatgcccgt
tcaactggtccctactcgctggtgactcagcaacctctgggtggtaaagcccaacagggg
ggtcagcggttcggagaaatggaagtctgggccctggaagcctacggagctgcctacacc
ctgcaggaactgctaacggtgaaatccgatgatatgcagggtcgcaacgaagcgctcaat
gcgatcgtcaaaggtcaggccattccccgccccggcacacccgagtcctttaaggtgctg
atgcgagagttgcaatccctctgtctggatattggggtacacaaagttgaagctacggaa
gatggtagcaaccgggatgtggaagtggatttgatggccgatgtcaacaatcgccgtacc
ccctcccgtcccacctacgaatccttctccagagctgatatggaggatggagatttttaa
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integrated database retrieval system
