Rippkaea orientalis PCC 8801: PCC8801_4114
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Entry
PCC8801_4114 CDS
T00806
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cyp
Rippkaea orientalis PCC 8801
Pathway
cyp03420
Nucleotide excision repair
cyp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCC8801_4114
03430 Mismatch repair
PCC8801_4114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyp03400
]
PCC8801_4114
Enzymes [BR:
cyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCC8801_4114
DNA repair and recombination proteins [BR:
cyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCC8801_4114
MMR (mismatch excision repair)
Other MMR factors
PCC8801_4114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
DEAD
AAA_30
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ACK68046
UniProt:
B7K5Z3
LinkDB
All DBs
Position
complement(4313300..4315645)
Genome browser
AA seq
781 aa
AA seq
DB search
MVIPMTVNNDFLAQLNTSQRRAVEHFCGPLLVVAGAGSGKTRALTYRIAHLISYHQVEPE
SILAVTFTNKAAREMKERIEKLFAQEMAFKKHGIRFDLLNEYEQKQLLSKVYKSTTKKLW
IGTFHSLCTRILRYDINKYQDERGRQWQRNFSIFDESDAQSLVKNIVTKQLNLDDKKFDP
RSVRYQISNAKNLGLSPDQYLQKNPSYKSRVIAEVYNEYQSQLAANNALDFDDLILIPVR
LFQQNESILGYWHSQFKHILVDEYQDTNQIQYELIRLLATNGETKKSEWNWQNRSIFVVG
DADQSIYSFRMADFTILLNFQSDFGDGLPDDDTRTMVKLEENYRSRENILEAANHLIENN
SQRIDKILKPTRGSGDFIYCYKADDEQIEAQLVIEHIQKLVRENPELNWGSFAILYRINA
QSRPFEDRLIMNSIPYNIVGGFKFYDRQEIKDAIAYLRLIANPSDTVSLLRIINTPRRSI
GKTSIESLLKAAQELEIPLWEIISDETSVNTLAGRAAKSVNKFAQMIKSFQEQLDSLSGA
EILNQVMEASGYVDDLKQKGTEEADNRLANIFELYNAVLQFQEDSEDQSLQGFLSNASLA
SDLDDLKEGQEKVSLMTLHSAKGLEFPVVFLVGLEEGLLPHARSVSDPLSLEEERRLCYV
GVTRAQEQLFLTYARERFVWGSKEAKMPSRFLQELPSDLIKSNVPPKVVKSRPSLTTSSP
KILKQSNETWSVGDQVIHQVFGEGEITRILGSGKKSSLAIKFPGLGQKIIDPTIAPLKRN
E
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggttatccccatgacagttaataatgattttctggctcaactcaacacttcacaacgt
cgcgcggttgaacacttttgtggtcctttattggtggtagcgggtgcggggtcggggaaa
actcgtgccctaacctaccgaattgcccatctgattagttatcatcaagttgaacccgaa
tcgattttagccgttacctttaccaataaagcggctagagaaatgaaagaaagaattgag
aaactttttgctcaagaaatggctttcaaaaagcatggtatcagatttgatctcctcaat
gaatatgaacaaaaacaacttttgtcgaaagtttataaaagtacgactaaaaagctttgg
attggaacttttcacagtttatgtactcgaatattgcgctatgatattaataaatatcaa
gacgagcggggacgacaatggcaacgaaatttttcaatttttgatgaatctgatgcccaa
agtttagttaagaatattgtcaccaaacaattaaacttagacgataaaaaatttgacccc
cgttccgtgcggtatcaaattagtaatgctaaaaatttagggctttctcccgatcagtat
ttacaaaaaaatccttcctataaaagtcgagtgattgctgaagtttacaacgaatatcag
tcccaattagcggctaataatgccttagattttgatgacttaatcctcatccccgttaga
ctatttcaacaaaatgaatcaattcttggctattggcatagtcaatttaaacatatttta
gtagatgagtatcaagataccaatcaaattcaatacgaattaatccgcttactggctacc
aatggagaaacgaaaaaaagcgaatggaattggcaaaatcgctctatttttgtcgtagga
gatgcggatcaatccatttatagttttcgcatggcagactttaccattttgctcaatttt
caatcagactttggggatggtttgcctgatgatgacacgcgaactatggttaaactagag
gaaaattatcggtcacgggaaaatattttagaagccgctaatcatttaattgaaaataac
agtcagcgtattgataagatcctgaaaccgacacggggatcaggagattttatttactgt
tacaaagcggatgatgaacaaattgaagcccaattggtgattgaacatatccaaaaatta
gtcagggaaaaccccgaattaaattggggaagttttgccattctttatcgaatcaatgcc
caatctcgaccctttgaagatcggttaatcatgaatagtattccctacaatattgtaggt
ggatttaagttttatgatcgtcaagaaatcaaagacgcgatcgcctatttacggctaatt
gctaacccatccgacacagtaagcttactgagaatcattaatactccccgtcgttccatt
ggcaaaacctcaatagaatctttattaaaagcagcccaagagttagagattcccctctgg
gaaattatctccgatgaaacctccgttaataccttagcaggacgggcagctaaatccgtc
aataaatttgcccaaatgattaaatcttttcaagaacaattagatagtttatcaggagca
gaaattcttaaccaagtgatggaagcgtcgggatatgttgatgatttaaaacaaaaagga
accgaagaagcggataatcgtttagcaaatattttcgagttatacaatgcggtgttacaa
ttccaagaagatagcgaagatcaaagcttacaaggctttttatctaatgcgtccctcgcg
tctgatctcgatgatttaaaagaaggacaagagaaagtttctttaatgacccttcattcc
gctaaagggttagaatttcccgttgtttttcttgtgggtttagaagaaggcttattaccc
catgcccgcagcgttagcgatcctttatccttagaagaagaacggcggttatgttatgtt
ggggtcactcgtgctcaagaacaattatttttgacctacgcgagagaacggtttgtttgg
gggtcaaaagaagcgaaaatgccctcacgatttttacaagaattgccctcagatttaatt
aagagtaatgttcctcctaaagtcgttaaatctcgcccatccttaacaacctcttcccct
aaaatcttgaagcaatctaatgaaacgtggtctgtcggagatcaggtgattcatcaggtg
tttggagagggggaaattacccgtattttaggatcaggtaaaaaatcgagtttagcgatt
aaatttccagggttaggacaaaaaattatcgatccgaccatagcccccctcaaacgcaac
gagtaa
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