Candidatus Atelocyanobacterium thalassa: UCYN_05030
Help
Entry
UCYN_05030 CDS
T01159
Name
(GenBank) predicted permease
KO
K11720
lipopolysaccharide export system permease protein
Organism
cyu
Candidatus Atelocyanobacterium thalassa
Pathway
cyu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cyu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
UCYN_05030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cyu02000
]
UCYN_05030
Transporters [BR:
cyu02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
UCYN_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
ADB95232
UniProt:
D3EP32
LinkDB
All DBs
Position
complement(554553..555761)
Genome browser
AA seq
402 aa
AA seq
DB search
MSPQTIFIRAIKFLGYFLKTLPVKNGWSFYLIDRYILSQLIGPLAFSVGLVSILGVAIGY
LSDLSNKVVESDLPLIQALEIIFLKIPEFTAYALPISMMLSTLLTYGRLSGDSELIALRV
CGASLYRLVMPAFIISLIMTGITFIFSELIVPAANYRVTSILVEHLQEERPYWQNKDIFY
PDYEKVVLPDGSTEKQLKHLFFAEKFDGQKLETLTVLEWLEKKLNRIVVSDSAAWNAQDE
TWDFFNGTIYQLAPDSSYQGTYSFKHRQLPLAKSAFEFIQEGRDPYEMNIFQAQKYMKIL
RVMEDEQKLRTFQVRVQQKIAFPFICIVFGVIGSALGTSPQYINRAMGFGLSVVIVFIYY
LLGFLIGSLGLIGVVSPFMAAWLPNAIGLGIGLYLLYWFAES
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtctccacaaacaatatttataagagctattaaatttttaggttactttctgaaaaca
ttaccagttaagaatggttggtccttttatttgatagatcgctatatcctatcacaacta
attggacctctggctttttcagttggcttagtatctatacttggagtagctattggttat
ttatcggacctgtcaaataaagtagtagagtctgatttacctttaatacaagcactagaa
attatattcttaaaaattccagaatttactgcttatgccttacccatttccatgatgtta
agtactttattaacttatggacgtcttagcggtgatagtgagttaattgctttacgagtt
tgtggagctagtctttatcgcctggttatgcctgcttttataataagtttgataatgaca
gggataacttttatatttagtgaattaatagttccagcagctaattaccgtgttactagt
atattagttgagcatctccaagaagaacgaccttattggcaaaataaagatattttttat
cctgattatgaaaaggtagtgcttcctgacggaagcactgagaaacaactaaaacattta
ttttttgcagaaaaatttgacggtcaaaaacttgagactttaacagtactagaatggctt
gaaaaaaaattaaatcgtattgttgtttcagattcagcagcatggaatgcacaagatgaa
acttgggatttttttaatggaactatttatcaactagctccagattcttcttatcaagga
acctattcctttaagcatagacagttacctctagccaaatctgcttttgaatttattcaa
gaaggtcgtgacccttatgaaatgaatatttttcaagcacaaaagtatatgaaaattctg
agagtgatggaagatgagcaaaaacttcgtacttttcaagttagagttcaacaaaaaata
gcttttccttttatatgcattgtatttggggtaattggctctgctctgggtacaagccct
cagtatatcaatcgtgcaatgggttttggactaagtgttgtaattgttttcatatactat
cttcttggctttttaattggtagtttaggtttaataggtgttgtttcaccatttatggct
gcttggttaccaaatgctattggcttaggtataggattatatttactttattggtttgct
gaatcttaa
DBGET
integrated database retrieval system