Desulfosporosinus acidiphilus: Desaci_0219
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Entry
Desaci_0219 CDS
T02148
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dai
Desulfosporosinus acidiphilus
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dai03400
]
Desaci_0219
DNA repair and recombination proteins [BR:
dai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desaci_0219
Archaeal homologous recombinant proteins
Desaci_0219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_29
AAA_23
AAA_21
ABC_tran
DUF87
Pox_A_type_inc
Motif
Other DBs
NCBI-ProteinID:
AFM39293
UniProt:
I4D0G9
LinkDB
All DBs
Position
214493..218107
Genome browser
AA seq
1204 aa
AA seq
DB search
MRPIKLKIAGLNSFREVQEIDFTKLCETGVFGIFGSTGSGKSTILDAMTLALYGTVERAA
NNTQGILNHGEEKLTVEYTFALAAGGRRITYRAERAYRRSGDRTVKSSACRLVKIEGDQE
SVLASKADEMTQKVEEMLGLTVEDFTRAVVLPQGKFAEFLTIKPKDRRLMLERLFSLEAY
GRNLTARLSEDLEDTRFHLNGVEQRLQGLGDASAKQVNLAEKELLDAAMASEKTLGNLNY
LKQEFEKAKELWGLQEQLHKVQEKETQRSASQPEMDKLAERLSLAERAEILRPILEDLNL
AEIKLQEAQEQKETIGSRLEKAREKKDRAEGQWLEINRQRLEKEPNFLRQLEQLEQAKRL
ETDIQSRSLKLTETRQHYSELDRTRKRLEQALQEALEKKKVLENRWQEGKIRLNQITVDP
AQREKVSSSIQALEAYEIVSKQVNDLQRDYKKNEAEAKSVQDREATLKLNVKTLQEAVEK
LKETLAKRQQDPSLREEILSRQAQELERYRHRIADIERAEREELEVRERLKVISLECQQA
REVLGRYEQEHAFVCQEIQKVRESLERKKSLVADLDQKNTARMLAESLVEGESCPVCGSV
HHPAPASKFEDGIREEANKDLEQTGSHLQTLEKQEAESATRRAVAQTQLAAKQELEQTQS
QLLTDKQAKVVEYREELLLDDKDLVMEELTRSLGMREENLQIQRRQFDEWNREQEQLKLQ
LEKAQHELNMAEEAWHKLGAQVAAITGMGSEIQNRLSYFLQEQSERQKRLDNLRGDISPS
EIRVLQNQYSLWDQAAGSLNQELANLEKEQRKTDEDQQKFLHEKNACELELEKLKTLGSE
AARTLTELKMQCDNLTEGKPAQERIEMVKQELDQIVTAEERLKKDYELLKEALTQAEQSL
AVSRKTLELAREGVDSIRLKLVQGLNTSRFSTVEDARKALCDPGDRISMEQRLSAFQQEG
KLLEQKRGDIERLLQGRGLPPEEWLAWSVRLNDAEKVHTEAIEKRGASLQRLNKLKEEHE
EWVRLEDERQTLGHRMGLLKTLQTVFKGNGFVEFLAQEQLANVCCDASERLKQLTNQRYA
LEIDTEGGFIMRDDANGGVRRPVNSLSGGETFLTALALALALSTQIQLRGESPLEFFFLD
EGFGTLDTHLLETVMNTLEKLRFQNIAIGIISHVPELRNRLARRLIVTPAEAGGVGSRVK
MEME
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgagacctattaaattaaagattgccggtttaaatagctttcgtgaggttcaggagatt
gattttacgaagttatgtgagacaggagtgttcggtatttttggctcaacggggagcgga
aaatcaacaatcctggacgccatgacccttgccctctacggcactgtggagcgagcggcg
aataacactcaagggatactcaatcatggtgaagaaaaactgaccgtagaatatacattt
gctttagcagcaggcggccggagaatcacttatcgcgcagagcgtgcttatcgtcgctcg
ggagatcgtaccgttaaatcttccgcttgcagattagttaaaatcgaaggggatcaggaa
tcagtcctggcatctaaggcagatgagatgacccaaaaagtcgaagaaatgctgggttta
accgtagaagattttactcgggcggttgttctgccccagggcaaatttgccgaatttcta
acgataaaacccaaagaccgacgtttaatgctggaacgcttgttttcactagaggcctat
ggacggaacttgacagctcgcctttccgaagaccttgaggacactcgtttccaccttaat
ggtgtggagcagcggctgcaagggttgggagatgcctcagcgaaacaagttaatctagct
gagaaggagcttttggatgctgcgatggcttcggagaagactctcggcaacttgaactat
ctaaagcaagagttcgaaaaggctaaggaactatggggtctgcaagaacagctgcataag
gttcaagaaaaggaaactcaacggtctgcatcgcaaccagaaatggacaaacttgcggaa
cgcctcagcttagcagaacgtgcggaaattctgcgcccaattttagaagatctaaacctg
gccgaaataaaactacaagaagcccaagaacaaaaagaaacgataggaagcagacttgag
aaagcaagagaaaaaaaggaccgcgctgagggacagtggctggaaatcaacaggcagcga
ctggagaaagaaccaaactttcttcgtcaattagagcaattagaacaagcaaaacgcctg
gaaacagatattcaaagccgcagtttaaaattaacagagacaaggcaacactatagtgaa
cttgatcggacacgtaaaagactggaacaagctcttcaggaagctctagaaaagaaaaag
gtcttagaaaaccgttggcaagagggaaagatccgtttaaatcaaataaccgttgatcca
gctcagcgtgagaaagttagttcttctatccaagcgttagaagcttatgagatagtctct
aaacaagtgaatgacttacaaagagactataagaaaaatgaggcggaagcaaagtctgtc
caagacagggaagcaactctgaaactgaatgtcaaaacacttcaggaagctgtggaaaag
cttaaagaaactctggccaaacggcagcaagatccttcgttgagggaagagattctcagc
aggcaggctcaggagttagaacgctaccgccataggattgctgacatcgaaagagcagaa
cgggaggaacttgaggtacgggagcgtttaaaggttatctctctggagtgccaacaagcc
cgggaagttttgggccgttacgaacaggaacatgcattcgtatgtcaggaaattcaaaag
gttagagagtctcttgagcgaaagaaaagtctggtggcagatctggatcagaaaaatact
gcccggatgcttgccgagtcattggtagaaggagagtcttgtcccgtctgcggttccgtt
catcaccctgccccagcctccaagttcgaggatgggattagggaagaagctaataaggat
cttgagcaaaccggcagccatctgcaaactcttgaaaagcaggaagcagagagcgcaaca
aggcgggcggttgcacaaactcagttagctgctaaacaggaacttgaacagacccagtca
cagctcttgacagacaaacaagcaaaggttgttgaatatcgcgaagaactattattagat
gataaggacttggtgatggaagaattaacccgatctttgggaatgcgggaggagaattta
cagatccagcgccggcaatttgacgaatggaatcgagaacaagagcagttgaagcttcag
ttagagaaggcccagcatgaacttaacatggcagaagaagcgtggcataagcttggggca
caagtcgctgcaatcacaggtatgggttcggagatccaaaataggcttagctattttttg
caagaacagtcggaacggcaaaagagattagacaacttgcggggggatatctctccgtcg
gagattcgagtcttacaaaaccaatattctctttgggatcaagccgccggaagcttaaac
caagagttagctaatcttgaaaaagagcagagaaaaacagatgaagatcagcagaaattt
ctccacgagaagaatgcttgtgagcttgagcttgagaaattaaaaaccttgggcagtgaa
gcagctcgtaccttgacagagcttaaaatgcagtgtgacaatttaacagaaggcaaacct
gctcaggaacgaatagagatggtaaagcaggagttagaccaaattgtcacagcagaggaa
cggcttaagaaggattacgaactgttgaaagaagctttaactcaggcggagcaaagctta
gcagtaagtagaaagacgttggaacttgcccgcgagggggtggattcaatccggcttaag
ttagtgcagggccttaatacatcacgtttttcaacagtagaagacgcaagaaaagccctt
tgcgatcccggagatcgtataagcatggagcagagactctctgcgtttcagcaggagggc
aaactccttgaacaaaagcgaggggatattgaacgactgcttcaggggcgaggtctcccg
ccggaagaatggctggcttggtcggtgaggttaaacgatgcagaaaaggtccatacggaa
gccattgagaagcggggtgccagcctgcagagactgaataagcttaaagaggaacatgaa
gaatgggtacgtttggaagatgaacgacaaactttaggccatcgaatgggcttacttaaa
acgttgcaaacggtgtttaaaggcaatgggtttgtggagtttctagcccaggaacagctg
gcaaatgtctgctgcgatgcttcagaacgcttgaaacaactgacaaatcagcgttatgct
ttggagatagatacggagggcggttttatcatgcgggatgatgccaatgggggagtacgc
cgtccggtaaacagcctttcaggtggagaaacgtttctcacagcccttgcgctggcgtta
gctttatctacccaaatccagctgcgcggggaatcccccctggaattcttctttttggat
gaaggatttggaactcttgatactcatttgctggagaccgtgatgaatacgctggaaaaa
ctgcgctttcaaaatatagcgattggaataataagtcatgttcccgagctgagaaatcgt
ctagccagacgccttattgtcacacctgcagaagcaggcggagttggcagtagagttaag
atggaaatggagtaa
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integrated database retrieval system
