Desulfosporosinus acidiphilus: Desaci_3538
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Entry
Desaci_3538 CDS
T02148
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dai
Desulfosporosinus acidiphilus
Pathway
dai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desaci_3538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dai03019
]
Desaci_3538
03016 Transfer RNA biogenesis [BR:
dai03016
]
Desaci_3538
Enzymes [BR:
dai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Desaci_3538
Messenger RNA biogenesis [BR:
dai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Desaci_3538
Transfer RNA biogenesis [BR:
dai03016
]
Prokaryotic type
tRNA degradation factors
Desaci_3538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
ATP-grasp
KH_2
Motif
Other DBs
NCBI-ProteinID:
AFM42419
UniProt:
I4D9E5
LinkDB
All DBs
Position
complement(3688494..3690647)
Genome browser
AA seq
717 aa
AA seq
DB search
MKQEVFEKSISVGGRTMTFQTGKIGKQAGGAIFLRYGDTVVSAFATCSSAPREGIDFFPL
TVEFEERMYAAGKIPGGFIKREGRASEKATLSARLIDRPIRPLFPEGFRNDVQVVATVMS
VDQDCATDITAINAASAALAVSNVPFEGPIAAVTVGLVDGEFIINPTIEQSGKSQMHLTV
AGTQEAVMMVEAGAQEVAEDLMLEAIMFGHQEIKTIAKFIADYREEALALGLAKEKIEVH
FEKIPDAMVEAVKAYAYNKLDAAVRVEEKKARENAIDAVKADALNYFEAEFPDDMKTVGT
ILEDMVHLIVRRLITDEHIRPDGRAVDEVRPLSIEVGLLPRTHGSGLFTRGQTQVLTVAT
LGAAGDEQILDGLGLERSKRYIHHYNFPPYSVGEIRPMRGPGRREIGHGALAERALVPVL
PDENEFPYTIRLVSEVLESNGSSSMASVCGSTLSLMDAGVPITAPVAGVAMGLIKEGDNF
AILTDIQGLEDHFGDMDFKVAGTTKGVTALQMDIKIKGVSREVLAQGLKQAKAGRLFILD
KMLAVLDKPRPQLSVYAPRIITTSIHPDKIRDVIGPGGKTIKKIIDETGVKIDIEDDGRV
FISSLEGEGGEQALKIIESLTQDVEVGKIYKGKVTRVMDFGAFVEVIPGVLGLSGKEGLV
HISQLSSERVEKVEDVVKVGDEITVKATAIDKQGRLNLSRKEAMASTRKEPPVNPAK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggaagtatttgaaaagtcaatctccgtcggtgggcgaacgatgactttccaa
accggaaaaatcggtaaacaggcggggggcgcaatttttcttcgttatggagatacggtg
gtttctgcttttgctacctgcagttcagcgcccagggaaggtattgacttttttcccttg
acggtagagtttgaagagcggatgtatgctgctgggaaaattccgggtggattcattaag
cgtgaaggcagagccagtgaaaaggctacattatcagcccgtttaatagatcgtcctatt
cgtccattatttccggaagggtttcgaaatgatgttcaagtggtagcaacagttatgtcc
gtcgatcaagactgtgccacggatatcacagcgattaatgccgcatcagcggccctggct
gtctcaaatgttccttttgagggacctatcgcagcggttactgtcggactcgtggatggg
gaatttattattaaccctacaattgaacagagcggcaagagtcagatgcacctgacggta
gcaggaacccaagaagcggttatgatggttgaagcaggtgctcaagaagtcgctgaagat
ttaatgctggaagcgatcatgttcggtcatcaagaaatcaaaacgattgccaagtttata
gctgattatcgtgaagaagctctggctttgggattagcaaaagaaaaaattgaagtgcac
tttgaaaaaatccctgacgcgatggttgaagcggttaaagcctatgcttataataaatta
gatgcagcggtgcgggtggaagagaaaaaggctcgggaaaatgccatcgatgccgttaaa
gctgatgccttgaattattttgaggctgagtttccggatgatatgaagacggtcggaacc
attttagaggacatggtgcatttaatcgttcgccgcttaattactgatgaacatatccga
cccgatgggcgtgcagttgacgaagtgcggccgctcagcatagaagtgggtcttttaccc
cgtactcatgggtcaggactttttacacgaggtcaaactcaagtgttgacggttgccacc
ctcggagctgccggcgatgaacaaatcttggacggattaggcctcgaacgctcaaaacgt
tacatacatcactataatttcccgccctacagtgtgggagaaatacggcctatgcgagga
cccggccgcagagagattggccatggcgctcttgcggaaagagctcttgttcctgtcttg
ccggatgaaaatgaatttccctatacgattcgcctggtatcggaagtattagaatccaac
ggctccagttctatggcctcagtttgcggtagtactctctcgctgatggatgcaggcgta
cctattactgcaccggtagccggggtagccatgggactcattaaagaaggggataatttc
gcaattctcacggatatccagggcttagaagatcattttggagatatggatttcaaagtt
gcaggaacgactaagggagttactgccttgcaaatggatataaagatcaaaggagtttcc
cgtgaagtcctagctcagggtttgaaacaggccaaagcaggtcgtctttttatccttgat
aaaatgctggctgttttagataaacctcgcccgcagctctcagtctatgctccgagaatt
attacgacatcaattcatcctgataaaatacgcgatgtcattggaccaggaggaaaaacc
atcaagaagatcatcgatgagacgggtgttaaaattgatattgaagatgacggccgcgtc
tttatctcttcccttgaaggagaaggcggcgaacaagctttaaaaattattgaatcttta
actcaagacgttgaagtcggtaaaatctacaaagggaaggttacccgggtcatggatttc
ggagcttttgttgaggttattcccggagtcctaggtttaagcggtaaagaaggtctggtg
catatttctcagctctcttcggaacgggtggaaaaagttgaagatgtcgtcaaggttggg
gatgaaattacggtgaaagctacggccattgataaacagggacgcttaaatctttcccgt
aaagaggccatggccagcactagaaaagagcctcccgtaaatcccgcgaaataa
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