Desulfatibacillum aliphaticivorans: Dalk_3578
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Entry
Dalk_3578 CDS
T00813
Name
(GenBank) Bacteriophage Mu transposase
Organism
dal
Desulfatibacillum aliphaticivorans
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Gene cluster
GFIT
Motif
Pfam:
DDE_2
HTH_Tnp_Mu_2
Mu-transpos_C
HTH_23
Terminase_5
HTH_Tnp_1
HTH_AsnC-type
DUF3158
Motif
Other DBs
NCBI-ProteinID:
ACL05266
UniProt:
B8FGN6
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Position
complement(4520129..4522090)
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AA seq
653 aa
AA seq
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MEKRTWTAQEIAKAIGLNERSVQRRANKEGWLYVAIKCRGGRKKVFAHSGLPIPVQASLL
KTYAPKKEAPKPKKGDICSEVLHEVFDRKSQKLKDQAAFRLDVVLAYHRMIKDGAPKTIA
KHEVAAANSISPASLYRWARMCEGLDRGDWLAALAPGFVGRTSTTEISEEAWAFIKSDYL
RQEQPALTACYQRLQEVARDKGWKIPSMKTFERRIKAIPLTIRVLLREGEKALAHMYPAQ
ERDKTMLHANEWINGDGYKHNVFVNWPGIDKPVRPKTWFWQDIYSGMIMGYRIDLTENTD
TIRLSFLDICDTYGRPRHVTIDNTRAAANKWMTGGVGTRFRFKIKDEDPLGIFPKCGVTV
HWAIPGWGQSKPVERAFGVGGVGERCDKDPALAGAWCGNNPNAKPENYMSRAVDLETFRM
AVARGVALINRMIRNTQVCAGKISAEQAFNESFKHVKRRDITPAQRRWMLLCAEAVTVQK
DGTIKLTAGKGYGVGNNRYGCARHELMAHIGKKVVVRFDPQKLHEDVYCYALDGSYIAPA
QCIFAAGFGDQQAAREHNRARAQFKKATKLAAKAEMAMTAIEAANLIPELTPPEPERSNV
VELQFGQKDTRPEKEKIAVNQDYFSGLDKEPEEDFDADALFAAGMNKTKWEED
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacgcacgtggacagcccaggaaatcgccaaagccattggcttgaatgaacga
tcagtgcaacgccgggccaataaggaaggctggctctatgtagcgatcaaatgccgtgga
gggcgtaaaaaggttttcgcccattccggcttgccgatcccggttcaggcatccttatta
aagacgtatgcgcccaagaaagaggctcccaagcctaaaaagggcgatatttgcagcgag
gttttgcacgaagtctttgaccgaaaatcccaaaagctgaaagaccaggccgcctttcgc
ctggacgtggttctggcctaccatcggatgattaaggacggcgctcccaagaccattgca
aagcatgaggtcgcggccgccaatagcatttcgcccgcctccctgtatcgttgggcgagg
atgtgcgaaggcctggatcgcggggattggctggcggctttggctccgggttttgtgggg
agaacctcaaccaccgaaatcagcgaagaggcctgggcctttatcaaatccgactatttg
cgccaggagcagcccgccctgaccgcctgctatcagcgtttgcaggaagtcgcccgggat
aagggctggaaaatcccctccatgaaaacctttgaacgccgcatcaaggcgattccgctc
actatccgggtgcttttgcgggaaggcgagaaagccctggcccacatgtatccggcccag
gagcgggacaaaaccatgctgcacgccaatgaatggatcaacggcgacggctacaaacac
aacgtgttcgtgaactggcccgggatagacaagccggtcaggcccaaaacgtggttctgg
caggacatctatagcggcatgatcatgggataccgcatcgacctgaccgaaaacacggac
accatccggctgtccttcctggatatttgcgacacctacggccgccccaggcacgtgacc
atcgacaacacccgggccgccgccaacaaatggatgacgggcggcgtgggaacacggttc
cgcttcaagatcaaggatgaagatcctctgggcatcttccccaagtgcggcgtgaccgtg
cattgggccatcccgggatggggccagagcaagccggtggagcgggctttcggcgtgggc
ggcgtgggcgaacgttgcgacaaagacccggcgttggctggcgcctggtgcggaaacaat
cccaacgccaagccggaaaactacatgagcagggccgtggacctggagactttccgcatg
gctgtggccaggggcgtggccctcataaaccggatgatccgcaacacccaggtttgcgcg
ggcaagatcagcgcggaacaggcctttaacgagtctttcaaacacgtcaaacgccgcgac
atcaccccggcccaacgccgctggatgctcctttgtgcggaggccgtgacggtccagaaa
gacggcacaatcaagctgacagccgggaagggatacggagtcggaaacaaccgctacgga
tgcgcccgccatgagttaatggcccacatcggcaaaaaggtggtggtccggttcgaccct
caaaagctccacgaggatgtgtactgctacgccctggacggcagctatatcgccccggcc
cagtgcatttttgcggcgggctttggagatcagcaggcggcccgggaacacaaccgggcg
cgggcgcaattcaagaaagcaaccaagctggcggccaaggcggaaatggccatgacggcc
atcgaggccgccaacctgatcccggaactcaccccgcccgagccagaacgctccaatgtg
gtggaattgcagttcggccaaaaagatacgcggccggaaaaggaaaagatcgccgtcaat
caggactatttttccgggctggacaaggaaccggaggaagatttcgacgcggatgcattg
ttcgcggccgggatgaataagacgaagtgggaggaagattag
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