KEGG   Desulfobacca acetoxidans: Desac_1893
Entry
Desac_1893        CDS       T01454                                 
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dao  Desulfobacca acetoxidans
Pathway
dao03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dao00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Desac_1893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dao03019]
    Desac_1893
Messenger RNA biogenesis [BR:dao03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Desac_1893
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 EAD2
Other DBs
NCBI-ProteinID: AEB09731
UniProt: F2NJS6
LinkDB
Position
complement(2120123..2121694)
AA seq 523 aa
MGLPVESISFLAVGLSGGLGVLAGFYLRRMIIESRIDSVENLAKKILDEARKEAETIKKE
EALRAKDQLFQMKVEFDKESKERRSELNILEKRLLQKEEHLEKKISILDSKESEINNRQK
LIDATEKTLKEKEIQYQNLIQEQRHNLERLAGMSSEEGRNLLLKTLEREVRTDAARLVKR
IETDAREVADKKAKEIIGLAIKRYASEYVAEQTVSVVNLPNEEMKGRIIGREGRNIRALE
AATGVDVIIDDTPEAVILSAFNPIRREIARRSLEHLITDGRIHPARIEEVVEKIGQEVEA
NIREAGEEAAFDAGVHGLHPELIKLLGKLRYRTSFAQNVLQHSIEVSYLCGIMAAELGLN
AKHAKRAGLLHDIGKAVDHEVEGPHAMIGAELAKRFGESVKVIHAIQAHHEDVPPESVLA
VLVQAADTLSGARPGARREMLETYVRRLEELERIARNFNGVNKTYAIQAGREIRLIVDSD
KVSDEEAFLLCREAAKKIETELTYPGQVKVTVIRETRAVEYAR
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgggattgccggtggaatctatttctttcctggcagtgggattgagcggcggtttaggg
gttctcgccggattttacctgaggcgcatgatcatcgaatcaaggatcgattcggtggaa
aatttagccaaaaagatcctagacgaagccaggaaagaggctgaaaccataaagaaggaa
gaggccttgcgagccaaggaccagctcttccagatgaaagttgagtttgacaaggaaagc
aaggagcgccgttcggaattaaacattttggaaaagcgactgctacagaaagaggaacat
ttagaaaagaaaatcagcatcctggatagtaaggagtccgagatcaacaatcgccagaaa
ctcattgatgctacggaaaaaacacttaaagaaaaagaaatccaatatcaaaacctcatc
caggaacagaggcataatttggagcggttggccggaatgagttctgaagagggccgcaat
ctgttgctaaaaactttggagcgggaggtgcgaaccgatgctgctcggctggtgaaacgg
attgaaaccgatgctcgagaagtggcagacaagaaagccaaagagatcatcggtctggcc
ataaaacggtatgccagcgaatatgtggcggagcagaccgtatcggtagtcaatcttccc
aacgaagagatgaagggacggatcatcggccgtgagggacggaatatccgagctttggag
gcagccaccggcgtggacgttattatcgatgatacccccgaggcggtcattctttcggct
ttcaaccctatccggcgcgagattgcccgccgctccctggagcatctgattaccgatggc
cgcatccacccggcccgtattgaagaagtggtagagaagatcggccaggaagtcgaggcc
aacatcagggaagccggcgaagaagccgctttcgacgccggagtgcatggattgcacccg
gagctgatcaagctattgggcaaactccgctatcgcaccagctttgcccagaatgtattg
cagcattccattgaggtgagctatctctgcggcattatggcggcggaacttggtttgaac
gccaaacatgccaaacgggccggactgctgcatgacatcggcaaggcggttgaccatgaa
gttgagggccctcacgccatgatcggcgcagagctggcaaaacgctttggggaatcggtc
aaggttattcatgccatccaagcgcatcatgaggatgtgcctcccgaatccgtgctggca
gttctggtgcaggcggcagataccctatccggcgcccgtcccggagcacgccgggagatg
ctggaaacctacgtccggcgtttggaagaactagagcggatcgcccgtaattttaacggg
gtcaataaaacctatgccatccaggccggccgggagatccgcctcatcgttgacagcgac
aaggtcagtgatgaagaggcctttctgttgtgtcgggaggcggccaaaaagatcgaaaca
gaattgacctatccgggacaggttaaagttaccgtcatccgggagacccgggcagtggaa
tacgcccgctag

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