Desulfobacca acetoxidans: Desac_2888
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Entry
Desac_2888 CDS
T01454
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
dao
Desulfobacca acetoxidans
Pathway
dao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desac_2888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dao03400
]
Desac_2888
DNA repair and recombination proteins [BR:
dao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desac_2888
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Desac_2888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
AAA_16
AAA_23
AAA_25
AAA_18
nSTAND3
AAA_22
AAA_33
nSTAND1
AAA_21
Viral_helicase1
AAA_14
ATPase
RsgA_GTPase
DnaJ_CXXCXGXG
APS_kinase
DUF4350
SLFN-g3_helicase
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEB10688
UniProt:
F2NE58
LinkDB
All DBs
Position
complement(3187895..3190708)
Genome browser
AA seq
937 aa
AA seq
DB search
MSTQHILIKGAREHNLKNIDLTLPRNSLIVITGVSGSGKSTLAFDTIYAEGQRRYVESLS
AYARQFLELMDKPDVDFIEGLSPAIAIEQRKASQNPRSTVATSTEIYDYLRLLFARLGVP
YCHQCGRAIASQSVPQMVEQIMSLPPGSRLSVLAPVIVDKKGEHQKLLQRLRLEGYGRVR
INGELLDLDEPIILDKNKRHTIEVLIDRLVVKSGLESRLTDSLELAVGLSDGVVKIAVLD
GEELLFSERFACEACGISYPELTPQLFSFNSPQGACPTCSGLGTQLVLDPELVVPDPDLS
IREGAILPWANRQSMYHQQMLEALEHHYNFSIRTPFQELSPEAQHVLLHGSGKEKIGFPT
ERNGRRTVEHRSFEGVLPNLQRRYLDTDSTFIREEIERFMNRQPCPDCQGGRLRREALAV
RLGELNISEVTQLTVGQCHSWFKGLILTDHQLTIGRRVLKEIIERLGFLLDVGLDYLTLN
RATATLSGGEGQRIRLATQIGSKLTGVLYVLDEPSIGLHQRDNLQLLRTLKTLRDLGNTV
IVVEHDPETIMSADYVVDMGPGAGNQGGEVVFSGSPRQLCQHPDSMTGTYLSGRRTIPVP
SPRRTPKGYLLLEGARGHNLKDVTLRLPLGVLTCVTGVSGSGKSTLIMDTLYKALCQKFY
RAKDRPEPFNRLQGLEHIDKVINIDQSPIGRTPRSNPATYTGLFTLVRDLFARLPEARAR
GYKPGRFSFNVRGGRCENCEGDGIIKIAMHFLPDVYVKCEVCQGKRFNPSTLEVKLKGKN
IAEVLEMTVAQAQIFFQDIPGLRNKFATLAEVGLDYIQLGQPATTLSGGEAQRIKLSREL
SKRATGRTLYILDEPTTGLHLADIEKLLIVLNKLVEAGNTVVVIEHNLEVVKTADFLFDL
GPEGGERGGRLVTCGTPEEVARSKNSYTGQFLQEILN
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacaacatattctgatcaaaggggctcgggaacacaatctgaaaaatattgat
ctgaccctgccccgcaacagtcttattgtcattactggggtgagtggttcggggaaatca
accctggccttcgataccatttatgccgaaggtcagcgccgctatgtggaatccctctcg
gcctatgcgcgccagtttctggaactgatggacaaaccggatgtggacttcatcgaagga
ctctccccggccattgctatcgagcagcgcaaggccagtcagaatccccgttctacggta
gccacttctacggaaatttacgattatctgcggctcctctttgcccgcctgggagtaccc
tattgtcaccaatgcgggcgggcgattgcctcccagagtgtgccccagatggtggaacag
atcatgagcctgcctcccggctctcgtctgagtgtgttggctccggtgatcgtcgataag
aaaggggagcatcagaagctgctgcagcgtctgcgcttagaaggctacggccgcgttcgg
ataaacggtgaactgctggatctggacgaacccattatcctggacaagaacaagcgccac
accattgaagtcctcatcgatcggctggtggtgaaatccgggcttgagtcccggctgact
gactccctggagctggcggtggggttgtcggatggcgtcgtgaaaatcgccgtgttagac
ggcgaggaattactgtttagtgaacgctttgcttgtgaggcctgtggcattagttatccc
gagctgacgcctcaattgttttcttttaacagtccccagggtgcctgcccgacctgcagc
ggtttgggtacccaactggtacttgatccggagttggtagttccggatcctgatcttagt
attcgggaaggcgccatcctcccctgggccaatcgtcagtctatgtatcatcaacagatg
ctggaggcactggaacaccactacaacttttcaatccggaccccctttcaggagctaagt
ccagaggcgcagcacgtcctcctgcatggttccgggaaggagaaaatcggctttccaacc
gaacggaacggccgtcgcaccgtagaacatcgatcatttgaaggggtccttcccaacctg
cagcggcgctatttggatacggattcgacatttattcgggaagagatcgagcgtttcatg
aacagacagccttgtcctgactgccaaggcggccgactccgccgggaagcactggcggtc
cggttgggggaactcaacatcagtgaggttacccaattaacggtgggtcaatgccatagc
tggtttaaaggtctaatcctgacggaccaccaactaactatcggccgacgggtactcaaa
gagattatcgagcgcttggggttcttattagatgtggggttggactatctgaccctcaac
cgcgccactgccaccctttccggcggcgaaggccagcgcatccggctggccacccagatc
ggctccaaactcacaggagtgctgtatgttttggacgaacccagcatcgggttgcatcag
cgagacaacctacagctcttgcgcaccttaaaaaccctgcgtgatctaggtaacacggtc
atcgtggtggagcatgacccggaaactatcatgagcgccgattatgtggtcgatatgggg
cctggcgccgggaaccaggggggcgaagtggttttcagcggttcgccccggcaattgtgt
cagcacccggattcaatgaccggcacctatctctccggccgccgcactattccggttccc
agtccaaggcggacacccaaagggtacctgcttttagaaggcgctcgaggccacaacctg
aaagacgtcaccctgcgactgcccctgggggtgctcacctgtgtcaccggagtgtcggga
tcgggtaagagcacgttgattatggataccttgtataaggctttgtgccaaaagttttac
cgggccaaagaccgccctgagccttttaatcgcctgcagggtttggagcacattgataaa
gtgattaatatcgaccagagccctattggccggacgcctcgttccaatccggcgacctac
accggattgttcactctcgtgcgcgacctgttcgcccgtctacccgaagcccgcgctcgc
gggtataaaccggggcgtttcagttttaatgtgaggggggggcgctgtgagaattgcgaa
ggcgatggcatcatcaaaatcgccatgcattttcttcccgatgtctatgtcaagtgtgag
gtttgccagggtaaacggtttaatcccagtaccttggaggtaaagttgaaagggaaaaat
attgccgaggtattagagatgacggtagctcaggcccagatttttttccaggatatcccg
gggttgcgcaacaagtttgctaccctggcggaagtgggtttggattatatccaattgggg
cagccggcgaccaccctctccggcggcgaggcccagcgtatcaaactctcccgagaacta
agcaagcgggccaccggcagaaccctctatattctggatgagcccaccaccggactgcat
ttggccgatatcgaaaaactcctgatagtattaaataaattggtggaggcgggtaacacc
gtagtagtcatcgaacataacctggaagtggttaaaacggcggattttctctttgacctg
ggaccggagggtggcgaacggggcggcaggctggtaacctgcggtaccccggaggaagtc
gcgcgatccaaaaactcgtacaccgggcagtttttgcaggaaatcttaaattaa
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