Desulfarculus baarsii: Deba_2285
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Entry
Deba_2285 CDS
T01284
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dbr
Desulfarculus baarsii
Pathway
dbr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dbr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Deba_2285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbr03400
]
Deba_2285
Enzymes [BR:
dbr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Deba_2285
DNA repair and recombination proteins [BR:
dbr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Deba_2285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ADK85647
UniProt:
E1QJA4
LinkDB
All DBs
Position
2534491..2535270
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AA seq
259 aa
AA seq
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MDWTIASFNVNGLRARLGILGDWLAHNQPDAVCLQETKVQDQDFPRQAVEELGYHVAFHG
QKSYNGVAILSKRPADEHGHGFGELWDDDQARLLWAKLDGLWVINVYAPQGRDPSDPAFA
YKLEFFRRLRAWLEARFSPGEALVCCGDFNVAPQDIDLHDPVKLAGQVGCHPDERAAYAN
VLDWGLEDVFRRLHPAQKQFTFWDYRLRGALSRDLGWRIDHILASAGLAPACGQCLVDMA
PRRLEKPSDHTPILARFSR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggactggaccatcgcctccttcaacgtcaacggcctgcgggcccggctgggcatcctc
ggcgactggctggcccacaaccagcccgacgccgtctgcctgcaagaaaccaaggtccag
gaccaggactttccgcgccaggccgtggaggagttgggctatcacgtggcctttcacggc
cagaagagctacaacggcgtcgccatcctcagcaaacggccggccgacgagcacggtcac
ggctttggtgagctgtgggacgacgatcaggcccggctgctctgggccaagctcgacggc
ctatgggtgataaacgtctacgcgccccagggccgcgacccctccgacccggcctttgcc
tacaagctggagtttttccgtcgcctgcgggcctggctggaggcccgtttcagccctggc
gaggccctggtctgctgcggcgacttcaacgtcgcgccccaggacatcgacctccacgac
ccggtcaagctggctgggcaggtggggtgccaccccgacgaacgagcggcctacgccaat
gtgctggattggggcctggaagacgtcttccggcggctgcatccggcgcaaaagcagttc
acgttctgggattatcgcctgcgtggggcgctcagccgcgacctcggctggcgcatcgac
cacatcctggccagcgccggcctggccccggcgtgcggccagtgcctggtggacatggcc
ccgcgccggctggaaaagccatcggaccacacgccgatcttggcccgcttcagtcgatag
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