Daucus carota (carrot): 108219072
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Entry
108219072 CDS
T05350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein R
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108219072
Spliceosome [BR:
dcr03041
]
Complex C
Other components
hnRNP proteins
108219072
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
BRAP2
RRM_5
CDC45
Nop14
Spo7_2_N
SpoIIP
DbpA
YL1
Motif
Other DBs
NCBI-GeneID:
108219072
NCBI-ProteinID:
XP_017247815
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Position
4:30498095..30502922
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AA seq
521 aa
AA seq
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MPRTRSNASTVKSSEPGKPAAAEKPVQLIEPVVSDGDNDETVEEEVEYEEVEVEEEEEEE
EEEEEVEEEEEEEEEEEEEVEEEEKDASVSNKAGSRKGQDSDDEMINAEAAEDEEKKHAE
LLALPPHGSEVYLGGIPHDASEDELKGFCGSIGEVTEVRIMKGKDSSENKGYAFVTFRSK
DLATKAIKDLNNTEFKGRKVKCSTSQAKHKLFVGNIPKSWGEEDIKKIVTKVGPGVNGVE
LLKDPQNSSRNRGFVFIEYYNHACAEYSRQKMSNPKFKLDDNAPTVSWADPKNAESSASS
QVKAVYVKNLPKNITQDQLKDVFEHHGKITKVVLPPAKAGQEKSRFGFVHFADRSSALKA
LKNTEKYEIEGQVLECSLAKPQADQRSSGFSSSSKAALLPSYQPPVGYGLVGGAYGALSA
GYGGAGFGQPLVYGRGPAPGMAMMPMLLPDGRIGYVLQQPGAQPYSSPPPPQQQRGGRSG
GRSGGSSSGGRSGGRGGGGSSSGGRRDSGGYSGGRNRYNPY
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggacaaggtcaaatgcttcaacagttaaatcaagtgaacctggaaaacctgca
gcggcagaaaagcctgttcagcttatagagccggtagtgtctgatggggataatgatgag
acagttgaagaagaagttgagtatgaagaggtagaagtggaagaagaagaggaggaggag
gaggaggaggaagaggtcgaagaagaggaagaagaagaggaagaggaggaggaagaagtt
gaggaggaagaaaaggatgcgagtgtctctaacaaagctggttcacgcaaaggccaagat
agtgatgatgagatgataaatgctgaagcagcagaggatgaggagaaaaagcatgccgag
ttacttgcccttcctcctcatggttcagaagtatacctaggtggtatccctcatgatgct
tctgaagacgaattgaaggggttctgtggatccataggggaagtcacagaggtccgtatt
atgaaaggaaaagactcgagtgaaaataagggttatgcttttgttacctttagaagtaag
gatttggctaccaaggccattaaagacctcaataatactgaatttaagggtaggaaggta
aagtgttcaacatctcaagcgaagcataagttatttgtaggtaatattcctaaaagttgg
ggagaggaagatataaagaaaattgtgaccaaggtagggccaggggtcaacggtgtggaa
ctgctaaaggacccccaaaattccagtcgaaatcgtggttttgtattcattgagtactat
aatcatgcctgtgcggagtattctaggcaaaagatgtcgaacccaaaatttaagctcgat
gacaatgctccaactgtgagttgggctgacccgaaaaatgcagaatcatctgcttcttca
caggtcaaagcagtgtacgtgaagaacttacccaaaaacatcacccaggatcagttaaaa
gatgtttttgagcaccatggaaagattacaaaagtagttctacctcctgcaaaggcagga
caagaaaagagcagatttggctttgttcactttgcggacaggtcaagtgccctaaaggct
ttaaagaacaccgagaagtatgagatagaaggccaagtgttggagtgctcacttgccaag
cctcaagcagatcaaaggtcatctggattttcaagttcttcaaaagcagcgttgcttcct
agttaccagcctccagttggttatggattggttgggggtgcctatggtgctctcagtgct
ggatatggcggtgcaggctttgggcagccactggtatatggaaggggacccgcacctggc
atggcaatgatgcctatgcttctcccagatggaagaattggatatgttttgcagcagcca
ggagcacagccctacagtagtccaccacctccccaacaacaaagaggtggtaggagtgga
ggaaggagtggtggaagttcaagtggtggaaggagtggaggaagaggtgggggtggaagc
tctagtggtggaaggcgtgacagtggcggctacagtggtggtcgtaaccgttataatcca
tactaa
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